Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SKP238-201ENST00000516483 249 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC008627.1-201ENST00000517511 1704 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC025260.1-201ENST00000548858 430 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 CYB5AP5-201ENST00000549779 389 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC022884.3-201ENST00000579571 248 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 RN7SL339P-201ENST00000580597 296 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 RNU4ATAC-201ENST00000580972 127 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AL355816.2-201ENST00000610049 647 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 AC005725.1-201ENST00000577346 2607 ntBASIC6.8□□□□□ -1.32
COL4A3BPQ9Y5P4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AL121768.1-201ENST00000613917 2544 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 VN2R3P-201ENST00000422626 1412 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 RN7SKP15-201ENST00000364742 309 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC016027.5-201ENST00000427227 210 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC092447.2-201ENST00000435487 669 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 RPL12P11-201ENST00000439970 501 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AL451063.1-201ENST00000450164 1133 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC022431.1-201ENST00000450941 438 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC104982.1-201ENST00000478775 574 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AL035690.1-201ENST00000490892 383 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 PRELID3BP6-201ENST00000503839 571 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC090568.1-201ENST00000509499 856 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 RNA5SP340-201ENST00000517132 107 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AP000859.1-201ENST00000525536 307 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 OR5AK3P-201ENST00000527486 1297 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC118942.1-201ENST00000529674 1035 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC023762.1-201ENST00000603280 584 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC067773.1-201ENST00000603284 1094 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AP002906.1-201ENST00000603405 233 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC090525.3-201ENST00000605601 189 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC027449.1-201ENST00000608890 407 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AL365181.4-201ENST00000609800 547 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC073569.3-201ENST00000619055 682 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 AC073488.3-201ENST00000631611 778 ntBASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A3BPQ9Y5P4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AP000568.1-201ENST00000282964 442 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 RNA5SP375-201ENST00000362975 119 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 RNA5SP27-201ENST00000363839 119 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 SNORA70.9-201ENST00000384370 135 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AL121835.1-201ENST00000404250 354 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 TCEA1P2-201ENST00000420496 906 ntBASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.78□□□□□ -1.32
COL4A3BPQ9Y5P4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms