Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AL592494.3-201ENST00000609485 464 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC025574.2-201ENST00000615621 514 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC018926.1-201ENST00000616335 435 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC005840.5-201ENST00000619166 599 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 MIR8080-201ENST00000622224 89 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 MIR6719-201ENST00000622428 87 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC090772.4-201ENST00000623599 362 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC018659.2-201ENST00000624690 715 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AL161912.4-201ENST00000623889 2468 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC034229.2-201ENST00000566945 2508 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 AC090220.1-201ENST00000593078 1699 ntBASIC6.42□□□□□ -1.38
COL20A1Q9P218 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL20A1Q9P218 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 OR9K1P-201ENST00000326513 941 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 RNU4-64P-201ENST00000410795 131 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 CRIP1P1-201ENST00000427567 185 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 MTCO1P51-201ENST00000427672 1060 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC007563.3-201ENST00000433233 371 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC073410.1-201ENST00000435125 589 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC046176.1-201ENST00000435260 1170 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 OR6D1P-201ENST00000436165 939 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 RSU1P1-201ENST00000453416 441 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 ATP5G1P3-201ENST00000463301 410 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 snoU109.5-201ENST00000516231 132 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 OR7E18P-201ENST00000592589 702 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 BNIP3P40-201ENST00000596017 556 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 AP004372.1-201ENST00000604842 844 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC004775.1-201ENST00000607389 753 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 AL118522.2-201ENST00000616045 615 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC132068.1-201ENST00000623805 459 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.41□□□□□ -1.38
COL20A1Q9P218 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.41□□□□□ -1.38
COL20A1Q9P218 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL20A1Q9P218 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL20A1Q9P218 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL20A1Q9P218 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL20A1Q9P218 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL20A1Q9P218 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL20A1Q9P218 MTHFD2P5-201ENST00000320415 844 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 RANP4-201ENST00000413361 655 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.4□□□□□ -1.38
COL20A1Q9P218 AL157884.3-201ENST00000448273 1184 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 RPL12P39-201ENST00000455456 496 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC018635.1-201ENST00000468292 1030 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 RPS7P6-201ENST00000485777 579 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 EIF1P7-201ENST00000487533 337 ntBASIC6.4□□□□□ -1.38
COL20A1Q9P218 AC090638.1-201ENST00000498296 909 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms