Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 HMGN1P9-201ENST00000515212 298 ntBASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AL136295.6-201ENST00000610486 658 ntBASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.79□□□□□ -1.64
KIAA1549Q9HCM3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 RNA5SP487-201ENST00000410186 122 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 SLC35E1P1-201ENST00000419313 864 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 RHOT1P3-201ENST00000436571 331 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 PA2G4P6-201ENST00000438325 1197 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 RPS18P6-201ENST00000476880 458 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 NDUFB5P1-201ENST00000508134 564 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 OR4A17P-201ENST00000526032 904 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 SAMMSON-209ENST00000641222 1100 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 RNA5SP453-201ENST00000362503 119 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 RPL19P16-201ENST00000433839 588 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 DNAJB5P1-201ENST00000454004 806 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 EIF1P7-201ENST00000487533 337 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AL445528.2-201ENST00000620582 470 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 MIR6730-201ENST00000622213 67 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 AC011493.1-201ENST00000596753 1632 ntBASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KIAA1549Q9HCM3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC010401.2-201ENST00000575137 4934 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC007342.5-201ENST00000571340 2142 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 MRRFP1-201ENST00000435941 1675 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 RN7SKP104-201ENST00000362605 328 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 U3.36-201ENST00000408418 213 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC104634.1-201ENST00000452720 462 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 RPL37AP8-201ENST00000494116 276 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 SNRPCP2-201ENST00000504370 475 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 MTND6P2-201ENST00000512226 524 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC233699.1-201ENST00000569955 1168 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AP001784.1-201ENST00000624107 428 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC073869.10-201ENST00000642016 354 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC018765.1-201ENST00000623357 3446 ntBASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC4.77□□□□□ -1.65
KIAA1549Q9HCM3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms