Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC006600.2-201ENST00000624834 2506 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC130304.1-201ENST00000622942 2385 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 RNA5SP131-201ENST00000365452 119 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AP000534.2-201ENST00000412729 568 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 RPL35AP24-201ENST00000413846 330 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AL133173.1-201ENST00000423458 397 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC114878.1-201ENST00000441166 358 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 LDHBP2-201ENST00000456969 1005 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC011225.1-201ENST00000457751 369 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 RNU1-88P-201ENST00000459274 128 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC090602.1-201ENST00000469695 252 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC100832.1-201ENST00000471945 383 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 COPS8P2-201ENST00000473228 627 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 RPS3AP15-201ENST00000483874 781 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC119751.4-201ENST00000507498 357 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 IMMP1LP3-201ENST00000604197 224 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 AC016769.4-201ENST00000616893 535 ntBASIC5.91□□□□□ -1.46
EBF3Q9H4W6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
EBF3Q9H4W6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 DPPA2P3-201ENST00000411853 655 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 CLUHP1-201ENST00000435012 1190 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC073410.1-201ENST00000435125 589 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC015983.1-201ENST00000441577 373 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 OR2AO1P-201ENST00000476497 403 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC008410.1-201ENST00000483777 339 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 RN7SL570P-201ENST00000484405 292 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 UBE2V1P12-201ENST00000503954 474 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 SNORA26.10-201ENST00000516427 141 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 NRBF2P4-201ENST00000520874 850 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 MTND5P21-201ENST00000531961 522 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC015720.2-201ENST00000567709 334 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC104763.3-201ENST00000613765 618 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 MIR8080-201ENST00000622224 89 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 AC069542.2-201ENST00000624816 216 ntBASIC5.9□□□□□ -1.46
EBF3Q9H4W6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
EBF3Q9H4W6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
EBF3Q9H4W6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms