Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
UPF3BQ9BZI7 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 SNORA5.1-201ENST00000384275 131 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AL133270.1-201ENST00000402635 279 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 NPM1P37-201ENST00000403105 874 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AL596448.1-201ENST00000415024 392 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 HYALP1-201ENST00000417674 1279 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 DPPA2P2-201ENST00000418220 897 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 Z84478.1-201ENST00000438230 1219 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 PTMAP6-201ENST00000439110 327 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AC108693.1-201ENST00000496068 432 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AC109464.1-201ENST00000511091 819 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AC092709.1-201ENST00000521355 1045 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 MIR7853-201ENST00000584820 132 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AC012616.1-201ENST00000600294 197 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AC008115.3-201ENST00000614874 549 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 MIR7155-201ENST00000615925 56 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 AC004808.2-201ENST00000627965 773 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.47□□□□□ -1.37
UPF3BQ9BZI7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.46□□□□□ -1.37
UPF3BQ9BZI7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
UPF3BQ9BZI7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
UPF3BQ9BZI7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.46□□□□□ -1.37
UPF3BQ9BZI7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
UPF3BQ9BZI7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 RN7SKP6-201ENST00000364795 319 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 MIR585-201ENST00000384887 94 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 GABARAPL3-201ENST00000412799 354 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AC002504.1-201ENST00000438281 691 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 H2AFZP6-201ENST00000444403 394 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AL450996.1-201ENST00000445574 1202 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 MORF4L1P4-201ENST00000450245 976 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AL133445.1-201ENST00000467051 452 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 RN7SL860P-201ENST00000473738 223 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AC012123.2-201ENST00000485809 248 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AC109481.1-201ENST00000509173 282 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 IGBP1P1-201ENST00000554337 1009 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 RN7SL290P-201ENST00000578661 300 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 MIR1269B-201ENST00000580405 75 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 MIR4505-201ENST00000582238 73 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 MAPK10-328ENST00000641553 4009 ntBASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
UPF3BQ9BZI7 MRRFP1-201ENST00000435941 1675 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 RN7SKP115-201ENST00000363177 317 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 RN7SKP28-201ENST00000364770 305 ntBASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
UPF3BQ9BZI7 MIR551A-201ENST00000385042 96 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms