Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL133173.1-201ENST00000423458 397 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 TNPO1P1-201ENST00000423641 1138 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 FMO7P-201ENST00000436045 768 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 SETP20-201ENST00000457046 852 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 RPS27AP2-201ENST00000457576 465 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 RN7SL583P-201ENST00000475692 287 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC106730.2-201ENST00000566641 540 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 MRPS21P7-201ENST00000566937 238 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 PPATP2-201ENST00000605635 508 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 RNA5SP440-201ENST00000612665 119 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC020763.5-201ENST00000623298 430 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 ICE2P1-201ENST00000512800 1849 ntBASIC5.15□□□□□ -1.59
COL21A1Q96P44 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL21A1Q96P44 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
COL21A1Q96P44 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL21A1Q96P44 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL21A1Q96P44 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL21A1Q96P44 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 MIR551A-201ENST00000385042 96 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AL450023.1-201ENST00000450868 751 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC090589.1-201ENST00000473109 362 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AL049874.2-201ENST00000492636 288 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC104109.1-201ENST00000498563 436 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC021106.1-201ENST00000509020 1058 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC091912.1-201ENST00000511351 248 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC074087.1-201ENST00000512059 724 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC098976.1-201ENST00000513014 541 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC022404.1-201ENST00000555320 273 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 FO393422.1-201ENST00000603908 708 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 AC025574.2-201ENST00000615621 514 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 AL512356.3-201ENST00000623005 461 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 AL691477.1-201ENST00000624398 162 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AL138820.1-201ENST00000617901 5305 ntBASIC5.14□□□□□ -1.59
COL21A1Q96P44 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.14□□□□□ -1.59
COL21A1Q96P44 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL21A1Q96P44 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 OR9K1P-201ENST00000326513 941 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 RNA5SP435-201ENST00000364044 108 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 RNU4-2-201ENST00000365668 141 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 RNA5SP241-201ENST00000391326 114 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 PPIAP9-201ENST00000403866 498 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 RN7SKP293-201ENST00000411389 296 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 AC007161.1-204ENST00000423039 460 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 NAP1L4P2-201ENST00000425958 899 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 OR52E3P-201ENST00000452083 936 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 VDAC2P4-201ENST00000452925 711 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 IGLVIV-64-201ENST00000518581 301 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms