Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 RNU2-18P-201ENST00000411224 162 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 EEF1B2P8-201ENST00000414101 671 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 SETP10-201ENST00000424368 814 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 HMGN1P2-201ENST00000445197 310 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AL450996.1-201ENST00000445574 1202 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AP000547.1-201ENST00000454360 617 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AZGP1P2-201ENST00000454506 345 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 MTND3P6-201ENST00000485242 339 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 SNORA70.11-201ENST00000515987 138 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 SNORA70.13-201ENST00000516116 138 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 SNORA43.3-201ENST00000517240 103 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 CYCSP22-201ENST00000517555 339 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AP000859.1-201ENST00000525536 307 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AC005363.1-201ENST00000530779 351 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AL049874.4-201ENST00000557593 255 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 MRPS21P7-201ENST00000566937 238 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AL359715.3-201ENST00000569267 2123 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AP005431.1-201ENST00000618479 319 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 uc_338.7-201ENST00000621834 124 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 AC114786.1-201ENST00000512892 1415 ntBASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAF3IP1Q8TDR0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 RNU4-23P-201ENST00000362839 140 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 EI24P3-201ENST00000399046 1062 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC234781.4-201ENST00000419384 244 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 RPS3P2-201ENST00000421346 701 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC094085.1-201ENST00000468914 584 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 IGKV2-4-201ENST00000523070 340 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC079064.1-201ENST00000528365 362 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 RBM22P12-201ENST00000567098 1255 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 PPATP2-201ENST00000605635 508 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 OR51C1P-201ENST00000608504 942 ntBASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRAF3IP1Q8TDR0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
TRAF3IP1Q8TDR0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
TRAF3IP1Q8TDR0 AL022322.2-201ENST00000624072 20397 ntBASIC5.71□□□□□ -1.49
TRAF3IP1Q8TDR0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
TRAF3IP1Q8TDR0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 AP005435.3-201ENST00000531260 3198 ntBASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 RNU6-697P-201ENST00000363348 107 ntBASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 SNORA5.1-201ENST00000384275 131 ntBASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 GAPDHP42-201ENST00000406848 981 ntBASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 SLC20A1P1-201ENST00000413906 956 ntBASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 RAB9AP4-201ENST00000415230 609 ntBASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 RPL34P3-201ENST00000421454 338 ntBASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 AC007161.1-204ENST00000423039 460 ntBASIC5.71□□□□□ -1.5
TRAF3IP1Q8TDR0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms