Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL121890.2-201ENST00000617644 465 ntBASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 AC073869.8-201ENST00000641806 335 ntBASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 AC002525.1-201ENST00000624392 1622 ntBASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 AC106872.5-201ENST00000508856 1416 ntBASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.23□□□□□ -1.57
CLHC1Q8NHS4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AL662874.1-201ENST00000426065 230 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 OR6D1P-201ENST00000436165 939 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC092106.1-201ENST00000444291 373 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AL589765.3-201ENST00000446084 462 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 RPS4XP12-201ENST00000461747 709 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 RNA5SP271-201ENST00000516700 88 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 OR11H3P-201ENST00000554547 982 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AL359219.2-201ENST00000555184 348 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 RN7SL290P-201ENST00000578661 300 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC134669.1-201ENST00000581275 672 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AP001005.3-201ENST00000622049 129 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC135068.5-201ENST00000624197 983 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 STX3-208ENST00000641815 3236 ntBASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.22□□□□□ -1.57
CLHC1Q8NHS4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLHC1Q8NHS4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 SNORA16A-201ENST00000384342 137 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC005297.1-201ENST00000444765 862 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 EEF1B2P6-201ENST00000445713 673 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 GAPDHP14-201ENST00000450472 937 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 RN7SL741P-201ENST00000482473 289 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC092709.1-201ENST00000521355 1045 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 IGKV2-4-201ENST00000523070 340 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC005363.1-201ENST00000530779 351 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AP004609.2-201ENST00000532177 190 ntBASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.21□□□□□ -1.58
CLHC1Q8NHS4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms