Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 GAPDHP24-201ENST00000328713 983 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RPL26P29-201ENST00000415623 438 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 MGAT2P2-201ENST00000427194 797 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 FTH1P8-201ENST00000498161 514 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC024558.1-201ENST00000505008 528 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 SUMO2P15-201ENST00000604285 278 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 SCARNA15-201ENST00000607520 4325 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 SNORA70.2-201ENST00000364506 135 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RNA5SP251-201ENST00000410614 137 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RN7SKP27-201ENST00000410684 333 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RPL23AP40-201ENST00000487630 390 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC004825.1-201ENST00000555068 586 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AP002799.1-201ENST00000623552 423 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 SNORA16A-201ENST00000384342 137 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 OR7E101P-201ENST00000400428 513 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 TDGF1P1-201ENST00000445734 527 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC244502.2-201ENST00000543361 851 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC018558.5-201ENST00000565840 952 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 BBX-203ENST00000402543 3980 ntTSL 5 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CASC19-248ENST00000641674 1356 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AP003170.5-201ENST00000397185 335 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 RHOT1P3-201ENST00000436571 331 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC004129.2-201ENST00000457229 287 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC091912.1-201ENST00000511351 248 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC021678.3-201ENST00000517893 476 ntBASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC1.67□□□□□ -2.14
SYNE1Q8NF91 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AL365361.1-201ENST00000566942 3481 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AC005294.1-201ENST00000355509 281 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 HMGA1P8-201ENST00000414130 321 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AC147055.3-201ENST00000510547 851 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AP003080.1-202ENST00000526526 915 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AP001922.4-201ENST00000526967 290 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 MIR378J-201ENST00000611988 109 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AC092692.1-201ENST00000623625 2595 ntBASIC1.66□□□□□ -2.14
SYNE1Q8NF91 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms