Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 SAMMSON-209ENST00000641222 1100 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 MAPK10-328ENST00000641553 4009 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AP000534.2-201ENST00000412729 568 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC110749.1-201ENST00000462007 357 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 RN7SL799P-201ENST00000475891 298 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 RPS21P4-201ENST00000487122 248 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC027308.1-201ENST00000517993 110 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC136428.4-201ENST00000634254 1155 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC099654.6-201ENST00000636487 512 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC239868.2-201ENST00000564237 4527 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC005261.6-201ENST00000623072 1387 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 MT-RNR2-201ENST00000387347 1559 ntBASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3CQ6NXT2 AC114774.1-201ENST00000507410 1770 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 MIR105-2-201ENST00000385083 81 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC005042.1-201ENST00000393397 800 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 RNU2-22P-201ENST00000411266 212 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AL390774.1-201ENST00000411924 246 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 SLC35E1P1-201ENST00000419313 864 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC092106.1-201ENST00000444291 373 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC114982.2-201ENST00000461396 358 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 RPL7P39-201ENST00000481157 744 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 RN7SL727P-201ENST00000482164 296 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 UBA52P7-201ENST00000486088 380 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 RN7SL30P-201ENST00000488416 306 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 PGAM1P13-201ENST00000507497 754 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 IGLV2-28-201ENST00000520681 304 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms