Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 HMGN1P9-201ENST00000515212 298 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 RN7SKP238-201ENST00000516483 249 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 TRIM51GP-201ENST00000534741 1350 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AL022322.2-201ENST00000624072 20397 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC079298.1-201ENST00000625026 1619 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 MTHFD2P5-201ENST00000320415 844 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 RPL10P10-201ENST00000403509 664 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 GCNT1P4-201ENST00000404096 329 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 Z82198.3-201ENST00000421145 199 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 ARAFP2-201ENST00000440565 559 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 ATP5LP2-201ENST00000440646 311 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 RPL12P49-201ENST00000441100 121 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 GTF3AP5-201ENST00000442645 697 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 PPIAP27-201ENST00000453800 265 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AL591473.1-201ENST00000464297 313 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 RPSAP37-201ENST00000470913 821 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC022215.1-201ENST00000481770 362 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC008410.1-201ENST00000483777 339 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC112484.3-201ENST00000505910 329 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 RN7SKP35-201ENST00000517210 151 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC022360.1-201ENST00000521058 340 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 IGLV3-30-201ENST00000524362 298 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AP000648.1-201ENST00000529682 397 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC027369.5-201ENST00000533838 755 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AL137072.1-201ENST00000603444 466 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AL031601.1-201ENST00000605702 394 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AP001437.1-201ENST00000608783 456 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AC025574.2-201ENST00000615621 514 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 OR14L1P-202ENST00000641545 3009 ntBASIC4.84□□□□□ -1.63
CCDC58Q4VC31 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC58Q4VC31 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC58Q4VC31 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.84□□□□□ -1.64
CCDC58Q4VC31 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC58Q4VC31 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.84□□□□□ -1.64
CCDC58Q4VC31 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC58Q4VC31 MUC2-202ENST00000613187 4845 ntBASIC4.84□□□□□ -1.64
CCDC58Q4VC31 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
CCDC58Q4VC31 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 OR51C1P-202ENST00000641159 1444 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RNU1-19P-201ENST00000363306 165 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RN7SKP224-201ENST00000364140 325 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RN7SKP257-201ENST00000364525 309 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC007618.1-201ENST00000366455 732 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AL672167.2-201ENST00000377164 879 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RPL21P67-201ENST00000402896 478 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 RPSAP35-201ENST00000413753 818 ntBASIC4.83□□□□□ -1.64
CCDC58Q4VC31 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC58Q4VC31 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms