Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DNM1P47-203ENST00000571780 12667 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AL589647.1-201ENST00000402485 466 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 U3.36-201ENST00000408418 213 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 RNGTTP1-201ENST00000420965 728 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 RPS27P18-201ENST00000431701 247 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 H3F3BP1-201ENST00000440551 403 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 SNRPCP3-201ENST00000474888 476 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC109464.1-201ENST00000511091 819 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC022832.1-201ENST00000530718 645 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC060766.1-201ENST00000590824 627 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC116651.1-201ENST00000609724 556 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 MIR6748-201ENST00000610433 71 ntBASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 AC007938.2-201ENST00000604666 2634 ntBASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 OR4F13P-202ENST00000560066 2054 ntBASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 RPL7P56-201ENST00000429441 717 ntBASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 BX679664.2-201ENST00000439282 283 ntBASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 AC073850.1-201ENST00000449243 255 ntBASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 AL672138.1-201ENST00000450604 1015 ntBASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 AC092647.2-201ENST00000452998 253 ntBASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SHROOM1Q2M3G4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 RNU1-146P-201ENST00000364015 165 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 RNU4-4P-201ENST00000364588 130 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 RNU6-233P-201ENST00000410845 141 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 RN7SKP126-201ENST00000411143 300 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 EI24P4-201ENST00000423683 1078 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 ATP5LP5-201ENST00000483050 299 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 PDCL3P4-201ENST00000489621 720 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AC105420.1-201ENST00000504389 582 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 GAPDHP62-201ENST00000515313 990 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AP001804.1-201ENST00000526868 919 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AL353729.2-201ENST00000605859 1249 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AL445528.2-201ENST00000620582 470 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 AC005261.6-201ENST00000623072 1387 ntBASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.3□□□□□ -1.4
SHROOM1Q2M3G4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHROOM1Q2M3G4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms