Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 YWHAEP1-201ENST00000453697 763 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC104109.1-201ENST00000498563 436 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 NPM1P21-201ENST00000513394 762 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 IGLVIV-64-201ENST00000518581 301 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 NRBF2P4-201ENST00000520874 850 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 IGKV3D-34-201ENST00000522638 302 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 MIR4505-201ENST00000582238 73 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC009027.1-201ENST00000604510 479 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 CU639417.4-201ENST00000623928 207 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC093671.1-201ENST00000624981 2929 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC133552.1-201ENST00000569988 4007 ntBASIC5.17□□□□□ -1.58
HMGCS1Q01581 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HMGCS1Q01581 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS1Q01581 AC005261.6-201ENST00000623072 1387 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC079298.1-201ENST00000625026 1619 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 RNA5SP187-201ENST00000384400 119 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 TNPO1P1-201ENST00000423641 1138 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 SRSF1P1-201ENST00000424058 520 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 RPL12P17-201ENST00000432393 498 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AP000281.1-201ENST00000444036 316 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 AL161722.1-201ENST00000446972 1032 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AP000797.2-201ENST00000475768 606 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 RPS12P31-201ENST00000491419 398 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 RPL15P21-201ENST00000495592 567 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC074087.1-201ENST00000512059 724 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 SCARNA16.4-201ENST00000516956 187 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC078878.1-201ENST00000539832 958 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 RN7SL356P-201ENST00000582228 248 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AP003400.3-201ENST00000624904 346 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 FRG1EP-201ENST00000634469 770 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 MTCO1P7-201ENST00000419523 1542 ntBASIC5.16□□□□□ -1.58
HMGCS1Q01581 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS1Q01581 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.15□□□□□ -1.58
HMGCS1Q01581 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
HMGCS1Q01581 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HMGCS1Q01581 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCS1Q01581 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCS1Q01581 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCS1Q01581 RNA5SP435-201ENST00000364044 108 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 RN7SKP81-201ENST00000365603 331 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 U3.23-201ENST00000391132 200 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 HSPD1P12-201ENST00000429127 1069 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 AC090018.1-201ENST00000434369 367 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 AL672138.1-201ENST00000450604 1015 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 OR52E3P-201ENST00000452083 936 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 RNU6-1334P-201ENST00000516032 105 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 AC022404.1-201ENST00000555320 273 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms