Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VSX2P58304 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.23□□□□□ -1.57
VSX2P58304 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.23□□□□□ -1.57
VSX2P58304 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.23□□□□□ -1.57
VSX2P58304 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.22□□□□□ -1.57
VSX2P58304 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
VSX2P58304 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 AC133552.1-201ENST00000569988 4007 ntBASIC5.22□□□□□ -1.57
VSX2P58304 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VSX2P58304 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 RPS27AP6-201ENST00000427962 448 ntBASIC5.22□□□□□ -1.57
VSX2P58304 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 GSTM5P1-201ENST00000434751 660 ntBASIC5.22□□□□□ -1.57
VSX2P58304 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.22□□□□□ -1.57
VSX2P58304 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.22□□□□□ -1.57
VSX2P58304 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.22□□□□□ -1.57
VSX2P58304 AZGP1P2-201ENST00000454506 345 ntBASIC5.22□□□□□ -1.57
VSX2P58304 RPS26P39-201ENST00000469206 341 ntBASIC5.22□□□□□ -1.57
VSX2P58304 RN7SL188P-201ENST00000469842 285 ntBASIC5.22□□□□□ -1.57
VSX2P58304 RPS4XP14-201ENST00000493072 781 ntBASIC5.22□□□□□ -1.57
VSX2P58304 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.22□□□□□ -1.57
VSX2P58304 GOLGA5P1-201ENST00000507317 980 ntBASIC5.22□□□□□ -1.57
VSX2P58304 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.22□□□□□ -1.57
VSX2P58304 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.22□□□□□ -1.57
VSX2P58304 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.22□□□□□ -1.57
VSX2P58304 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.22□□□□□ -1.57
VSX2P58304 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 BLZF2P-201ENST00000553776 1130 ntBASIC5.22□□□□□ -1.57
VSX2P58304 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VSX2P58304 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.22□□□□□ -1.57
VSX2P58304 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.22□□□□□ -1.57
VSX2P58304 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.22□□□□□ -1.57
VSX2P58304 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.22□□□□□ -1.57
VSX2P58304 AC021766.1-201ENST00000624404 741 ntBASIC5.22□□□□□ -1.57
VSX2P58304 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VSX2P58304 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.22□□□□□ -1.57
VSX2P58304 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VSX2P58304 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
VSX2P58304 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.22□□□□□ -1.57
VSX2P58304 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
VSX2P58304 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VSX2P58304 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
VSX2P58304 Z83820.1-201ENST00000456978 1499 ntBASIC5.21□□□□□ -1.58
VSX2P58304 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.21□□□□□ -1.58
VSX2P58304 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VSX2P58304 RNA5SP335-201ENST00000363817 110 ntBASIC5.21□□□□□ -1.58
VSX2P58304 RNA5SP187-201ENST00000384400 119 ntBASIC5.21□□□□□ -1.58
VSX2P58304 AL133388.1-201ENST00000404509 287 ntBASIC5.21□□□□□ -1.58
VSX2P58304 AL133325.1-201ENST00000421090 382 ntBASIC5.21□□□□□ -1.58
VSX2P58304 SRSF1P1-201ENST00000424058 520 ntBASIC5.21□□□□□ -1.58
VSX2P58304 MGAT2P2-201ENST00000427194 797 ntBASIC5.21□□□□□ -1.58
VSX2P58304 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.21□□□□□ -1.58
VSX2P58304 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.21□□□□□ -1.58
VSX2P58304 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.21□□□□□ -1.58
VSX2P58304 OR2AO1P-201ENST00000476497 403 ntBASIC5.21□□□□□ -1.58
VSX2P58304 AC111000.6-201ENST00000514471 709 ntBASIC5.21□□□□□ -1.58
VSX2P58304 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.21□□□□□ -1.58
VSX2P58304 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.21□□□□□ -1.58
VSX2P58304 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.21□□□□□ -1.58
VSX2P58304 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.21□□□□□ -1.58
VSX2P58304 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.21□□□□□ -1.58
VSX2P58304 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.21□□□□□ -1.58
VSX2P58304 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.21□□□□□ -1.58
VSX2P58304 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.21□□□□□ -1.58
VSX2P58304 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.21□□□□□ -1.58
VSX2P58304 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.21□□□□□ -1.58
VSX2P58304 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.21□□□□□ -1.58
VSX2P58304 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.21□□□□□ -1.58
VSX2P58304 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.21□□□□□ -1.58
VSX2P58304 AC136428.4-201ENST00000634254 1155 ntBASIC5.21□□□□□ -1.58
VSX2P58304 AC073869.7-201ENST00000640874 297 ntBASIC5.21□□□□□ -1.58
VSX2P58304 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VSX2P58304 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VSX2P58304 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.21□□□□□ -1.58
VSX2P58304 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms