Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 AL627171.1-201ENST00000618845 1308 ntBASIC5.34□□□□□ -1.55
CDH12P55289 RN7SKP145-201ENST00000363291 303 ntBASIC5.34□□□□□ -1.55
CDH12P55289 RNU6-1251P-201ENST00000364502 107 ntBASIC5.34□□□□□ -1.55
CDH12P55289 SNORA70.6-201ENST00000383934 134 ntBASIC5.34□□□□□ -1.55
CDH12P55289 MIR130B-202ENST00000385018 82 ntBASIC5.34□□□□□ -1.55
CDH12P55289 AL096711.1-201ENST00000404780 554 ntBASIC5.34□□□□□ -1.55
CDH12P55289 RNU4-27P-201ENST00000410889 139 ntBASIC5.34□□□□□ -1.55
CDH12P55289 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH12P55289 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH12P55289 MRPS21P2-201ENST00000424704 264 ntBASIC5.34□□□□□ -1.55
CDH12P55289 NPM1P18-201ENST00000434232 732 ntBASIC5.34□□□□□ -1.55
CDH12P55289 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 Z80107.1-201ENST00000436830 412 ntBASIC5.34□□□□□ -1.55
CDH12P55289 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH12P55289 ABCC13-202ENST00000463099 3842 ntBASIC5.34□□□□□ -1.55
CDH12P55289 RPL32P14-201ENST00000463196 378 ntBASIC5.34□□□□□ -1.55
CDH12P55289 SNRPCP3-201ENST00000474888 476 ntBASIC5.34□□□□□ -1.55
CDH12P55289 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH12P55289 AC091874.2-201ENST00000505889 720 ntBASIC5.34□□□□□ -1.55
CDH12P55289 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 AC004923.2-201ENST00000529649 369 ntBASIC5.34□□□□□ -1.55
CDH12P55289 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH12P55289 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH12P55289 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH12P55289 AL121839.1-201ENST00000556233 1185 ntBASIC5.34□□□□□ -1.55
CDH12P55289 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH12P55289 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH12P55289 AC023762.1-201ENST00000603280 584 ntBASIC5.34□□□□□ -1.55
CDH12P55289 AC015849.2-201ENST00000605738 409 ntBASIC5.34□□□□□ -1.55
CDH12P55289 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 RMST_5.1-201ENST00000618704 126 ntBASIC5.34□□□□□ -1.55
CDH12P55289 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 OR11H2-202ENST00000641517 1085 ntBASIC5.34□□□□□ -1.55
CDH12P55289 OR5AC4P-202ENST00000642086 985 ntBASIC5.34□□□□□ -1.55
CDH12P55289 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH12P55289 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH12P55289 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CDH12P55289 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDH12P55289 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.34□□□□□ -1.56
CDH12P55289 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CDH12P55289 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.34□□□□□ -1.56
CDH12P55289 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CDH12P55289 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.34□□□□□ -1.56
CDH12P55289 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.34□□□□□ -1.56
CDH12P55289 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDH12P55289 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH12P55289 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 GTF2IP4-201ENST00000453092 2054 ntBASIC5.33□□□□□ -1.56
CDH12P55289 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 AL356317.1-201ENST00000396110 1436 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC005261.2-201ENST00000593427 4258 ntBASIC5.33□□□□□ -1.56
CDH12P55289 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDH12P55289 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 MIR133A2-201ENST00000347538 102 ntBASIC5.33□□□□□ -1.56
CDH12P55289 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 GLUD1P9-201ENST00000420997 1173 ntBASIC5.33□□□□□ -1.56
CDH12P55289 OR10T1P-201ENST00000424327 947 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH12P55289 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH12P55289 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH12P55289 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH12P55289 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH12P55289 AL627224.1-201ENST00000448334 444 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC005077.1-201ENST00000449226 375 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC098847.1-201ENST00000473094 348 ntBASIC5.33□□□□□ -1.56
CDH12P55289 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 AC018797.1-201ENST00000510791 255 ntBASIC5.33□□□□□ -1.56
CDH12P55289 PRMT5P1-201ENST00000514351 598 ntBASIC5.33□□□□□ -1.56
CDH12P55289 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.33□□□□□ -1.56
CDH12P55289 IGKV3D-25-201ENST00000519599 235 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 OR4A17P-201ENST00000526032 904 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH12P55289 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms