Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC091905.4-201ENST00000623432 202 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCS2P54868 THAP12P4-201ENST00000528321 2266 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCS2P54868 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCS2P54868 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCS2P54868 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCS2P54868 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HMGCS2P54868 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCS2P54868 AL158152.1-201ENST00000602652 1435 ntBASIC6.16□□□□□ -1.42
HMGCS2P54868 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.15□□□□□ -1.42
HMGCS2P54868 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
HMGCS2P54868 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMGCS2P54868 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.15□□□□□ -1.42
HMGCS2P54868 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGCS2P54868 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGCS2P54868 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGCS2P54868 SNORD56.6-201ENST00000384569 71 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 GJA6P-201ENST00000415117 1042 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 AL807761.1-201ENST00000417622 171 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCS2P54868 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGCS2P54868 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCS2P54868 AC073648.4-201ENST00000442655 781 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCS2P54868 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGCS2P54868 RN7SL188P-201ENST00000469842 285 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
HMGCS2P54868 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCS2P54868 ELOCP28-201ENST00000590044 317 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGCS2P54868 AC005084.1-201ENST00000605160 304 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 AC087385.3-201ENST00000620477 187 ntBASIC6.15□□□□□ -1.42
HMGCS2P54868 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGCS2P54868 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HMGCS2P54868 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.15□□□□□ -1.43
HMGCS2P54868 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
HMGCS2P54868 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.15□□□□□ -1.43
HMGCS2P54868 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HMGCS2P54868 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HMGCS2P54868 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.15□□□□□ -1.43
HMGCS2P54868 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HMGCS2P54868 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGCS2P54868 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGCS2P54868 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGCS2P54868 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGCS2P54868 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HMGCS2P54868 AC068769.1-201ENST00000474767 2426 ntBASIC6.14□□□□□ -1.43
HMGCS2P54868 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGCS2P54868 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGCS2P54868 U3.3-201ENST00000362986 216 ntBASIC6.14□□□□□ -1.43
HMGCS2P54868 RNA5SP455-201ENST00000365190 119 ntBASIC6.14□□□□□ -1.43
HMGCS2P54868 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGCS2P54868 TRGV5P-201ENST00000419915 354 ntBASIC6.14□□□□□ -1.43
HMGCS2P54868 AC092651.1-201ENST00000426110 312 ntBASIC6.14□□□□□ -1.43
HMGCS2P54868 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGCS2P54868 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGCS2P54868 AC092324.1-201ENST00000468671 324 ntBASIC6.14□□□□□ -1.43
HMGCS2P54868 AC097484.1-201ENST00000471148 389 ntBASIC6.14□□□□□ -1.43
HMGCS2P54868 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGCS2P54868 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGCS2P54868 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGCS2P54868 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGCS2P54868 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGCS2P54868 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HMGCS2P54868 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGCS2P54868 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
HMGCS2P54868 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGCS2P54868 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGCS2P54868 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCS2P54868 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCS2P54868 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCS2P54868 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCS2P54868 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCS2P54868 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGCS2P54868 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCS2P54868 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCS2P54868 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
HMGCS2P54868 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCS2P54868 RPS26P38-201ENST00000414476 348 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGCS2P54868 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
HMGCS2P54868 NPM1P36-201ENST00000415681 835 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCS2P54868 KRT8P51-201ENST00000438938 274 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 GYG1P1-201ENST00000460864 698 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGCS2P54868 AC021106.1-201ENST00000509020 1058 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.13□□□□□ -1.43
HMGCS2P54868 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms