Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC005294.1-201ENST00000355509 281 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 RN7SKP292-201ENST00000365522 317 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC1A1P43005 OR6E1P-201ENST00000414424 923 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 TNPO1P1-201ENST00000423641 1138 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 SUMO2P3-201ENST00000438311 288 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC1A1P43005 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 AC093827.1-201ENST00000480094 861 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 PFN1P8-201ENST00000497012 543 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC1A1P43005 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC1A1P43005 RN7SKP99-201ENST00000517028 307 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 TRIM51GP-201ENST00000534741 1350 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC1A1P43005 PRPF19P1-201ENST00000584766 898 ntBASIC5.61□□□□□ -1.51
SLC1A1P43005 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC1A1P43005 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC1A1P43005 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC1A1P43005 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC1A1P43005 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC1A1P43005 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC1A1P43005 AC007618.1-201ENST00000366455 732 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC1A1P43005 SNORA16A-201ENST00000384342 137 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 RPL12P9-201ENST00000412942 488 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 SDHDP6-201ENST00000414693 480 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC1A1P43005 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC1A1P43005 PRUNEP1-201ENST00000425846 705 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SLC1A1P43005 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC1A1P43005 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC1A1P43005 HMGN1P2-201ENST00000445197 310 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC1A1P43005 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC1A1P43005 RPL7P41-201ENST00000485823 957 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 RN7SL423P-201ENST00000486202 304 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 RN7SL814P-201ENST00000487715 300 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 ENPP7P11-201ENST00000505915 627 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC1A1P43005 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC1A1P43005 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC1A1P43005 AP004607.2-201ENST00000533949 322 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC1A1P43005 AC015720.2-201ENST00000567709 334 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 AC127024.5-201ENST00000580085 462 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 AC005252.1-201ENST00000604518 1063 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 AC008833.1-201ENST00000611633 691 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC1A1P43005 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SLC1A1P43005 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC1A1P43005 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC1A1P43005 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC1A1P43005 AC023421.1-201ENST00000590535 1785 ntBASIC5.6□□□□□ -1.51
SLC1A1P43005 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SLC1A1P43005 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
SLC1A1P43005 AL138820.1-201ENST00000617901 5305 ntBASIC5.59□□□□□ -1.51
SLC1A1P43005 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 AC120036.2-201ENST00000509729 1474 ntBASIC5.59□□□□□ -1.51
SLC1A1P43005 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC1A1P43005 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC1A1P43005 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SLC1A1P43005 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC1A1P43005 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SLC1A1P43005 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 CXADRP1-201ENST00000398098 1095 ntBASIC5.59□□□□□ -1.51
SLC1A1P43005 RPL21P67-201ENST00000402896 478 ntBASIC5.59□□□□□ -1.51
SLC1A1P43005 RNA5SP487-201ENST00000410186 122 ntBASIC5.59□□□□□ -1.51
SLC1A1P43005 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.59□□□□□ -1.51
SLC1A1P43005 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SLC1A1P43005 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.59□□□□□ -1.51
SLC1A1P43005 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.59□□□□□ -1.51
SLC1A1P43005 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.59□□□□□ -1.51
SLC1A1P43005 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms