Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.41□□□□□ -1.54
RPA3P35244 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPA3P35244 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPA3P35244 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.41□□□□□ -1.54
RPA3P35244 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPA3P35244 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPA3P35244 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPA3P35244 AC079298.1-201ENST00000625026 1619 ntBASIC5.41□□□□□ -1.54
RPA3P35244 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPA3P35244 AL731532.2-201ENST00000623542 1953 ntBASIC5.4□□□□□ -1.54
RPA3P35244 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPA3P35244 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPA3P35244 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.4□□□□□ -1.54
RPA3P35244 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPA3P35244 AL353796.1-201ENST00000561542 3241 ntBASIC5.4□□□□□ -1.54
RPA3P35244 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPA3P35244 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPA3P35244 MIR551A-201ENST00000385042 96 ntBASIC5.4□□□□□ -1.54
RPA3P35244 CTSL3P-202ENST00000412179 788 ntBASIC5.4□□□□□ -1.54
RPA3P35244 OR6E1P-201ENST00000414424 923 ntBASIC5.4□□□□□ -1.54
RPA3P35244 BMS1P17-202ENST00000416720 316 ntBASIC5.4□□□□□ -1.54
RPA3P35244 AL389925.1-201ENST00000432257 728 ntBASIC5.4□□□□□ -1.54
RPA3P35244 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RPA3P35244 SETP20-201ENST00000457046 852 ntBASIC5.4□□□□□ -1.54
RPA3P35244 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.4□□□□□ -1.54
RPA3P35244 AC093827.1-201ENST00000480094 861 ntBASIC5.4□□□□□ -1.54
RPA3P35244 AC104109.1-201ENST00000498563 436 ntBASIC5.4□□□□□ -1.54
RPA3P35244 NIFKP7-201ENST00000503365 834 ntBASIC5.4□□□□□ -1.54
RPA3P35244 TMEM97P2-201ENST00000517841 403 ntBASIC5.4□□□□□ -1.54
RPA3P35244 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.4□□□□□ -1.54
RPA3P35244 PPATP2-201ENST00000605635 508 ntBASIC5.4□□□□□ -1.54
RPA3P35244 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.4□□□□□ -1.54
RPA3P35244 AC008691.1-209ENST00000642094 814 ntBASIC5.4□□□□□ -1.54
RPA3P35244 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RPA3P35244 SMG1P7-201ENST00000565246 2704 ntBASIC5.4□□□□□ -1.55
RPA3P35244 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.4□□□□□ -1.55
RPA3P35244 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.4□□□□□ -1.55
RPA3P35244 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RPA3P35244 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.4□□□□□ -1.55
RPA3P35244 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.4□□□□□ -1.55
RPA3P35244 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RPA3P35244 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RPA3P35244 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RPA3P35244 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.39□□□□□ -1.55
RPA3P35244 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RPA3P35244 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RPA3P35244 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.39□□□□□ -1.55
RPA3P35244 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.39□□□□□ -1.55
RPA3P35244 CDY17P-201ENST00000414121 1282 ntBASIC5.39□□□□□ -1.55
RPA3P35244 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.39□□□□□ -1.55
RPA3P35244 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.39□□□□□ -1.55
RPA3P35244 VDAC2P4-201ENST00000452925 711 ntBASIC5.39□□□□□ -1.55
RPA3P35244 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.39□□□□□ -1.55
RPA3P35244 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.39□□□□□ -1.55
RPA3P35244 RPL7P51-201ENST00000490532 749 ntBASIC5.39□□□□□ -1.55
RPA3P35244 USP9YP2-201ENST00000504503 1000 ntBASIC5.39□□□□□ -1.55
RPA3P35244 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.39□□□□□ -1.55
RPA3P35244 AC109464.1-201ENST00000511091 819 ntBASIC5.39□□□□□ -1.55
RPA3P35244 USP9YP1-201ENST00000513521 1002 ntBASIC5.39□□□□□ -1.55
RPA3P35244 NRBF2P4-201ENST00000520874 850 ntBASIC5.39□□□□□ -1.55
RPA3P35244 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.39□□□□□ -1.55
RPA3P35244 AC027544.3-201ENST00000535082 757 ntBASIC5.39□□□□□ -1.55
RPA3P35244 AC022404.1-201ENST00000555320 273 ntBASIC5.39□□□□□ -1.55
RPA3P35244 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.39□□□□□ -1.55
RPA3P35244 AC022884.2-201ENST00000578535 580 ntBASIC5.39□□□□□ -1.55
RPA3P35244 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RPA3P35244 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.39□□□□□ -1.55
RPA3P35244 FO393422.1-201ENST00000603908 708 ntBASIC5.39□□□□□ -1.55
RPA3P35244 MIR6839-201ENST00000620425 113 ntBASIC5.39□□□□□ -1.55
RPA3P35244 CU639417.4-201ENST00000623928 207 ntBASIC5.39□□□□□ -1.55
RPA3P35244 AL691477.1-201ENST00000624398 162 ntBASIC5.39□□□□□ -1.55
RPA3P35244 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.39□□□□□ -1.55
RPA3P35244 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RPA3P35244 LINC01963-201ENST00000562038 3148 ntBASIC5.39□□□□□ -1.55
RPA3P35244 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 KARSP1-201ENST00000451871 1752 ntBASIC5.39□□□□□ -1.55
RPA3P35244 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.39□□□□□ -1.55
RPA3P35244 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPA3P35244 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RPA3P35244 AC104623.2-202ENST00000623477 4002 ntBASIC5.39□□□□□ -1.55
RPA3P35244 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
RPA3P35244 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
RPA3P35244 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RPA3P35244 AC100778.3-201ENST00000580060 1750 ntBASIC5.38□□□□□ -1.55
RPA3P35244 OR9G4-201ENST00000302957 984 ntBASIC5.38□□□□□ -1.55
RPA3P35244 RNU1-19P-201ENST00000363306 165 ntBASIC5.38□□□□□ -1.55
RPA3P35244 RN7SKP6-201ENST00000364795 319 ntBASIC5.38□□□□□ -1.55
RPA3P35244 RNU4-2-201ENST00000365668 141 ntBASIC5.38□□□□□ -1.55
RPA3P35244 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RPA3P35244 DBIP1-201ENST00000401435 260 ntBASIC5.38□□□□□ -1.55
RPA3P35244 SNORA11.3-201ENST00000408471 128 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms