Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA9P31269 AP001284.1-201ENST00000528393 2118 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 AC114947.2-201ENST00000565748 2125 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA9P31269 HSPD1P7-201ENST00000447985 1686 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA9P31269 RNA5SP326-201ENST00000363209 110 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 AL590762.4-201ENST00000425885 253 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 AL772161.1-201ENST00000439130 476 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXA9P31269 RPL12P39-201ENST00000455456 496 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 SNORD125-201ENST00000459538 96 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXA9P31269 AC093815.1-201ENST00000508637 280 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 ASNSP4-201ENST00000511103 447 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXA9P31269 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 AC013701.1-201ENST00000522657 465 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 OR5AM1P-201ENST00000532136 1032 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA9P31269 AC024940.3-201ENST00000538551 316 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HOXA9P31269 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXA9P31269 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXA9P31269 AC239803.2-201ENST00000610161 430 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HOXA9P31269 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA9P31269 AC138907.8-201ENST00000623981 2256 ntBASIC5.69□□□□□ -1.5
HOXA9P31269 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
HOXA9P31269 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA9P31269 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
HOXA9P31269 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA9P31269 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA9P31269 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA9P31269 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.69□□□□□ -1.5
HOXA9P31269 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA9P31269 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA9P31269 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXA9P31269 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXA9P31269 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXA9P31269 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.68□□□□□ -1.5
HOXA9P31269 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXA9P31269 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA9P31269 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA9P31269 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXA9P31269 RPS4XP20-201ENST00000505751 772 ntBASIC5.68□□□□□ -1.5
HOXA9P31269 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA9P31269 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA9P31269 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXA9P31269 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA9P31269 AP002884.5-201ENST00000595053 1132 ntBASIC5.68□□□□□ -1.5
HOXA9P31269 CYP4F35P-202ENST00000636121 390 ntBASIC5.68□□□□□ -1.5
HOXA9P31269 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
HOXA9P31269 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXA9P31269 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXA9P31269 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXA9P31269 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXA9P31269 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA9P31269 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA9P31269 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA9P31269 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA9P31269 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXA9P31269 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA9P31269 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA9P31269 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA9P31269 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HOXA9P31269 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
HOXA9P31269 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXA9P31269 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA9P31269 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA9P31269 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 RN7SKP17-201ENST00000411242 351 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA9P31269 OR10T1P-201ENST00000424327 947 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA9P31269 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXA9P31269 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA9P31269 AC009963.4-201ENST00000448535 339 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 RPS23P9-201ENST00000448848 438 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 RPS17P5-201ENST00000498293 408 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 ST13P12-201ENST00000508958 1094 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXA9P31269 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA9P31269 AP001922.4-201ENST00000526967 290 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA9P31269 AC122688.1-201ENST00000541494 223 ntBASIC5.67□□□□□ -1.5
HOXA9P31269 AC092490.3-201ENST00000545370 572 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms