Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SNORA43.3-201ENST00000517240 103 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH3P22223 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 HMGB1P42-201ENST00000532126 553 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AC090424.1-201ENST00000535243 736 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 AC244502.2-201ENST00000543361 851 ntBASIC5.56□□□□□ -1.52
CDH3P22223 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH3P22223 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH3P22223 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 AC060780.2-201ENST00000589047 198 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 QTRT1P1-201ENST00000604344 1078 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AL713998.2-201ENST00000604538 1198 ntBASIC5.56□□□□□ -1.52
CDH3P22223 FAM72A-208ENST00000607379 1139 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH3P22223 AL355974.3-201ENST00000617383 467 ntBASIC5.56□□□□□ -1.52
CDH3P22223 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH3P22223 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH3P22223 AC022919.1-201ENST00000624979 626 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
CDH3P22223 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 Z83820.1-201ENST00000456978 1499 ntBASIC5.56□□□□□ -1.52
CDH3P22223 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH3P22223 AC117409.1-201ENST00000470499 1310 ntBASIC5.55□□□□□ -1.52
CDH3P22223 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH3P22223 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH3P22223 RNA5SP242-201ENST00000364171 118 ntBASIC5.55□□□□□ -1.52
CDH3P22223 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH3P22223 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.55□□□□□ -1.52
CDH3P22223 CHEK2P5-201ENST00000423877 246 ntBASIC5.55□□□□□ -1.52
CDH3P22223 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH3P22223 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH3P22223 AC002504.1-201ENST00000438281 691 ntBASIC5.55□□□□□ -1.52
CDH3P22223 OR52Y1P-201ENST00000452418 828 ntBASIC5.55□□□□□ -1.52
CDH3P22223 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH3P22223 AC098583.1-201ENST00000480875 255 ntBASIC5.55□□□□□ -1.52
CDH3P22223 TRBV5-2-201ENST00000489095 273 ntBASIC5.55□□□□□ -1.52
CDH3P22223 AC021678.3-201ENST00000517893 476 ntBASIC5.55□□□□□ -1.52
CDH3P22223 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH3P22223 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH3P22223 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH3P22223 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH3P22223 AC068993.1-201ENST00000546724 589 ntBASIC5.55□□□□□ -1.52
CDH3P22223 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH3P22223 AC022404.1-201ENST00000555320 273 ntBASIC5.55□□□□□ -1.52
CDH3P22223 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH3P22223 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH3P22223 RN7SL753P-201ENST00000581238 290 ntBASIC5.55□□□□□ -1.52
CDH3P22223 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 GMCL1P2-201ENST00000605230 823 ntBASIC5.55□□□□□ -1.52
CDH3P22223 AL356608.1-201ENST00000610034 820 ntBASIC5.55□□□□□ -1.52
CDH3P22223 AC008833.1-201ENST00000611633 691 ntBASIC5.55□□□□□ -1.52
CDH3P22223 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH3P22223 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 AL606537.1-201ENST00000607258 2011 ntBASIC5.55□□□□□ -1.52
CDH3P22223 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH3P22223 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH3P22223 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDH3P22223 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH3P22223 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH3P22223 RNA5SP46-201ENST00000362370 120 ntBASIC5.54□□□□□ -1.52
CDH3P22223 SNORA64.1-201ENST00000362600 132 ntBASIC5.54□□□□□ -1.52
CDH3P22223 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH3P22223 RNU6-729P-201ENST00000384399 107 ntBASIC5.54□□□□□ -1.52
CDH3P22223 GAPDHP15-201ENST00000398586 975 ntBASIC5.54□□□□□ -1.52
CDH3P22223 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.54□□□□□ -1.52
CDH3P22223 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.54□□□□□ -1.52
CDH3P22223 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH3P22223 AL662874.1-201ENST00000426065 230 ntBASIC5.54□□□□□ -1.52
CDH3P22223 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH3P22223 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH3P22223 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms