Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC6P09630 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC6P09630 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.2□□□□□ -1.42
HOXC6P09630 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC6P09630 TRGV5P-201ENST00000419915 354 ntBASIC6.2□□□□□ -1.42
HOXC6P09630 MTND2P9-201ENST00000422293 931 ntBASIC6.2□□□□□ -1.42
HOXC6P09630 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 RPS29P22-201ENST00000472363 168 ntBASIC6.2□□□□□ -1.42
HOXC6P09630 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC6P09630 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC6P09630 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC6P09630 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC6P09630 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC6P09630 AC122134.1-202ENST00000569111 1201 ntBASIC6.2□□□□□ -1.42
HOXC6P09630 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC6P09630 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXC6P09630 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXC6P09630 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC6P09630 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC6P09630 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC6P09630 NF1P10-201ENST00000613227 742 ntBASIC6.2□□□□□ -1.42
HOXC6P09630 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 AP003072.5-201ENST00000623872 773 ntBASIC6.2□□□□□ -1.42
HOXC6P09630 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC6P09630 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC6P09630 CYP4F35P-202ENST00000636121 390 ntBASIC6.2□□□□□ -1.42
HOXC6P09630 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC6P09630 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC6P09630 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC6P09630 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC6P09630 CASC19-281ENST00000642118 1554 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC6P09630 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXC6P09630 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 RN7SKP103-201ENST00000363848 320 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 RNU4-4P-201ENST00000364588 130 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 RNU1-136P-201ENST00000384181 164 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC6P09630 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC6P09630 MTATP6P11-201ENST00000428071 670 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 TMEM183AP1-205ENST00000432739 290 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 GSTM5P1-201ENST00000434751 660 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 BX679664.2-201ENST00000439282 283 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC6P09630 Z80107.2-201ENST00000445127 392 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 GAPDHP25-201ENST00000447061 1001 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC6P09630 RPL12P39-201ENST00000455456 496 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 OR7L1P-201ENST00000456181 380 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 RPL5P12-201ENST00000477071 851 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 RN7SKP253-201ENST00000516424 309 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 OR5AZ1P-201ENST00000527448 943 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC6P09630 AC092490.3-201ENST00000545370 572 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 NPM1P42-201ENST00000560329 862 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC6P09630 AC090079.2-201ENST00000575289 768 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
HOXC6P09630 FAM25E-202ENST00000608562 189 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 AC020978.9-201ENST00000624380 1141 ntBASIC6.19□□□□□ -1.42
HOXC6P09630 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC6P09630 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HOXC6P09630 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC6P09630 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
HOXC6P09630 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC6P09630 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC6P09630 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC6P09630 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXC6P09630 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC6P09630 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms