Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 AC079298.1-201ENST00000625026 1619 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC097461.1-201ENST00000568928 2821 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.1□□□□□ -1.75
CXCL1P09341 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CXCL1P09341 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 GAPDHP24-201ENST00000328713 983 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 IL6STP1-201ENST00000346911 1020 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 RPS24P12-201ENST00000402084 394 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 CBX1P3-201ENST00000413296 527 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.1□□□□□ -1.75
CXCL1P09341 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.1□□□□□ -1.75
CXCL1P09341 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 AK4P4-201ENST00000419465 646 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.1□□□□□ -1.75
CXCL1P09341 MRPL35P2-201ENST00000448009 511 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 PPIAP32-201ENST00000449940 472 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 SEPT7P3-201ENST00000455017 621 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC093166.4-201ENST00000457867 318 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC108751.2-201ENST00000469993 231 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC020779.1-201ENST00000478757 796 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 RPS3AP15-201ENST00000483874 781 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 RN7SL57P-201ENST00000493687 290 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC122714.1-201ENST00000502510 459 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC021146.3-201ENST00000511911 260 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 HMGN1P17-201ENST00000513734 295 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC138517.1-201ENST00000515724 568 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 WBP1LP3-201ENST00000523033 208 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 HMGN2P36-201ENST00000529541 409 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.1□□□□□ -1.75
CXCL1P09341 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.1□□□□□ -1.75
CXCL1P09341 MRPL45P2-203ENST00000573318 473 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 RN7SL230P-201ENST00000580835 303 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 MIR6885-201ENST00000612241 66 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AL121890.2-201ENST00000617644 465 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CXCL1P09341 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 MT-RNR2-201ENST00000387347 1559 ntBASIC4.1□□□□□ -1.75
CXCL1P09341 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CXCL1P09341 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CXCL1P09341 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CXCL1P09341 AC007382.1-201ENST00000624376 2618 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.09□□□□□ -1.75
CXCL1P09341 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CXCL1P09341 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
CXCL1P09341 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CXCL1P09341 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CXCL1P09341 RNU1-19P-201ENST00000363306 165 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CXCL1P09341 AL009179.1-201ENST00000406085 265 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.09□□□□□ -1.75
CXCL1P09341 NENFP1-201ENST00000419476 466 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 FABP7P2-201ENST00000429946 379 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.09□□□□□ -1.75
CXCL1P09341 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.09□□□□□ -1.75
CXCL1P09341 RPL36AP55-201ENST00000454114 305 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 RPL7AP28-201ENST00000464513 571 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 AC090686.1-201ENST00000481577 749 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 RNU6-964P-201ENST00000516524 69 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 AC027308.1-201ENST00000517993 110 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CXCL1P09341 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 AL356801.1-201ENST00000559320 294 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.09□□□□□ -1.75
CXCL1P09341 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC4.09□□□□□ -1.75
CXCL1P09341 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.09□□□□□ -1.75
CXCL1P09341 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.09□□□□□ -1.75
CXCL1P09341 AP000769.2-201ENST00000602344 396 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 TAS2R6P-201ENST00000605022 826 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.09□□□□□ -1.75
CXCL1P09341 MIR6793-201ENST00000612376 63 ntBASIC4.09□□□□□ -1.75
CXCL1P09341 AC015819.1-201ENST00000613588 663 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms