Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC068790.4-201ENST00000602474 263 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 AC083809.1-201ENST00000615051 472 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 MIR7703-201ENST00000620784 77 ntBASIC5.66□□□□□ -1.5
PDGFBP01127 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.66□□□□□ -1.5
PDGFBP01127 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.66□□□□□ -1.5
PDGFBP01127 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDGFBP01127 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 AC005618.1-201ENST00000606901 3148 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 AP005432.1-201ENST00000580891 3485 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 Y_RNA.62-201ENST00000362840 99 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 RN7SKP6-201ENST00000364795 319 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 SNORA62-201ENST00000365493 153 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 CHMP1B2P-201ENST00000399581 597 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFBP01127 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 RAB9AP5-201ENST00000437794 597 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 RAB9AP2-201ENST00000443911 597 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 TPT1P12-201ENST00000448968 492 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 AC096741.1-201ENST00000472250 846 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 AC068587.1-201ENST00000483613 781 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 AC004980.4-201ENST00000513375 203 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 AC020937.1-201ENST00000519677 1013 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PDGFBP01127 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 AP005901.4-201ENST00000577336 569 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 AC234771.5-201ENST00000600161 514 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.65□□□□□ -1.5
PDGFBP01127 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFBP01127 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFBP01127 AC025574.2-201ENST00000615621 514 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 AC087385.3-201ENST00000620477 187 ntBASIC5.65□□□□□ -1.5
PDGFBP01127 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDGFBP01127 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDGFBP01127 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.65□□□□□ -1.51
PDGFBP01127 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDGFBP01127 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDGFBP01127 MTCO1P22-201ENST00000604619 1360 ntBASIC5.65□□□□□ -1.51
PDGFBP01127 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDGFBP01127 SYT14P1-202ENST00000600441 1448 ntBASIC5.65□□□□□ -1.51
PDGFBP01127 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.65□□□□□ -1.51
PDGFBP01127 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFBP01127 PARP4P1-201ENST00000435945 2337 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFBP01127 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PDGFBP01127 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFBP01127 UGT2B27P-201ENST00000505092 1620 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFBP01127 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFBP01127 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDGFBP01127 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFBP01127 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PDGFBP01127 MIR130A-201ENST00000385274 89 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PDGFBP01127 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
PDGFBP01127 RNA5SP487-201ENST00000410186 122 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 RN7SKP126-201ENST00000411143 300 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AC211486.3-201ENST00000412694 621 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AL691447.1-201ENST00000419456 387 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFBP01127 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFBP01127 AL138787.1-202ENST00000437804 898 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFBP01127 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFBP01127 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFBP01127 IGLV3-24-201ENST00000517477 197 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 NPM1P52-201ENST00000518264 846 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 HMGB1P40-201ENST00000525121 540 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AP003080.1-202ENST00000526526 915 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFBP01127 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.64□□□□□ -1.51
PDGFBP01127 ATP5J2P6-201ENST00000565203 266 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFBP01127 AC137695.1-201ENST00000604126 489 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AC005084.1-201ENST00000605160 304 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AC015660.5-201ENST00000623238 564 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFBP01127 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFBP01127 AC073869.7-201ENST00000640874 297 ntBASIC5.64□□□□□ -1.51
PDGFBP01127 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFBP01127 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFBP01127 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFBP01127 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFBP01127 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFBP01127 PWAR1-201ENST00000624188 2414 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms