Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 AC093225.1-201ENST00000506867 1408 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS4BO75351 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 SNORA43.1-201ENST00000364863 140 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 RPL5P19-201ENST00000404228 893 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AL139805.1-201ENST00000407837 289 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 MTATP6P20-201ENST00000414147 562 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AL035422.1-201ENST00000414193 397 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS4BO75351 MTND2P16-201ENST00000419987 799 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS4BO75351 RPL12P12-201ENST00000424633 501 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS4BO75351 AC092634.2-201ENST00000428146 1010 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 MTCO1P43-201ENST00000431831 488 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 OR2L9P-201ENST00000444456 913 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 Z77249.1-201ENST00000444622 1175 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 RPL7P61-201ENST00000451721 751 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 LRRC37A14P-201ENST00000452297 462 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 RN7SL369P-201ENST00000477138 299 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 SYT14P1-201ENST00000481459 721 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
VPS4BO75351 RPS4XP14-201ENST00000493072 781 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 AC010627.1-201ENST00000503819 1294 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS4BO75351 AC133963.2-201ENST00000513686 578 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 ZNF519P4-201ENST00000514008 125 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AC119751.5-201ENST00000514077 770 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 BUD31P1-201ENST00000521828 359 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 MORF4L1P3-201ENST00000525966 950 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS4BO75351 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS4BO75351 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.98□□□□□ -1.45
VPS4BO75351 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 AC087888.1-201ENST00000550884 1254 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS4BO75351 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS4BO75351 NPM1P42-201ENST00000560329 862 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS4BO75351 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
VPS4BO75351 AC234772.3-201ENST00000602277 528 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 ELOCP35-201ENST00000604289 336 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AL365400.2-201ENST00000605604 902 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AC015722.2-201ENST00000622210 551 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS4BO75351 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 AC132825.7-201ENST00000638744 335 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 MTCO1P28-201ENST00000574177 1528 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
VPS4BO75351 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS4BO75351 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VPS4BO75351 EIF3EP1-201ENST00000433978 1316 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 CIR1P2-201ENST00000514821 1342 ntBASIC5.98□□□□□ -1.45
VPS4BO75351 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS4BO75351 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS4BO75351 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 RNA5SP514-201ENST00000363717 111 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
VPS4BO75351 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS4BO75351 RNU6-481P-201ENST00000384194 107 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AL031985.1-201ENST00000392713 418 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AL391422.1-201ENST00000402155 436 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms