Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL035090.1-201ENST00000454835 332 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 RN7SL273P-201ENST00000481561 299 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 USP9YP2-201ENST00000504503 1000 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 USP9YP1-201ENST00000513521 1002 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 MTATP6P1-201ENST00000514057 681 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.07□□□□□ -1.6
UPK1AO00322 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1AO00322 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1AO00322 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1AO00322 AC015720.2-201ENST00000567709 334 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1AO00322 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1AO00322 OR51C1P-201ENST00000608504 942 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 AC244107.2-201ENST00000611773 76 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1AO00322 AC126175.1-201ENST00000617041 758 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1AO00322 AC006600.2-201ENST00000624834 2506 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1AO00322 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1AO00322 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1AO00322 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 AC005261.6-201ENST00000623072 1387 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 AC004817.4-201ENST00000602396 3625 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 OR56A4-201ENST00000330728 1209 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1AO00322 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 AC104843.2-201ENST00000427666 297 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1AO00322 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1AO00322 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1AO00322 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1AO00322 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1AO00322 AL672138.1-201ENST00000450604 1015 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
UPK1AO00322 AC069304.1-201ENST00000491593 704 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1AO00322 RN7SKP99-201ENST00000517028 307 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 AP006245.2-201ENST00000522004 300 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1AO00322 AC022404.1-201ENST00000555320 273 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1AO00322 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1AO00322 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1AO00322 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 MIR6839-201ENST00000620425 113 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 AL691477.1-201ENST00000624398 162 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1AO00322 AC103703.1-201ENST00000634783 663 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
UPK1AO00322 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1AO00322 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.06□□□□□ -1.6
UPK1AO00322 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
UPK1AO00322 AC100778.3-201ENST00000580060 1750 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1AO00322 AL603750.1-201ENST00000624216 1717 ntBASIC5.06□□□□□ -1.6
UPK1AO00322 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK1AO00322 SMG1P7-201ENST00000565246 2704 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 XKRY2-202ENST00000623874 1581 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 XKRY-202ENST00000624960 1581 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1AO00322 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 RNA5SP234-201ENST00000363916 119 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPK1AO00322 AL391422.1-201ENST00000402155 436 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1AO00322 SRSF1P1-201ENST00000424058 520 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 SUMO2P8-201ENST00000434672 286 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 GSTM5P1-201ENST00000434751 660 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1AO00322 AC012075.1-201ENST00000436549 580 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC105399.1-202ENST00000447303 205 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 RANP1-206ENST00000455094 651 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC092754.1-201ENST00000472975 479 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC023424.1-201ENST00000496058 459 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms