Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC138207.8-204ENST00000579588 527 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC188H7C350 AP001437.1-201ENST00000608783 456 ntBASIC5.68□□□□□ -1.5
CCDC188H7C350 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC188H7C350 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC188H7C350 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC188H7C350 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC188H7C350 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC188H7C350 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC188H7C350 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 AL034549.2-201ENST00000618285 3373 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC188H7C350 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC188H7C350 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC188H7C350 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
CCDC188H7C350 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 AL672167.2-201ENST00000377164 879 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 MIR191-201ENST00000384873 92 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC188H7C350 FAM183DP-201ENST00000421987 399 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC188H7C350 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 AL512637.1-201ENST00000439523 1231 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC188H7C350 AC245028.2-201ENST00000458673 253 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 AC069304.1-201ENST00000491593 704 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 RPL15P21-201ENST00000495592 567 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC188H7C350 RN7SKP34-201ENST00000516142 244 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 OR4A41P-201ENST00000533053 928 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 OR8G3P-201ENST00000533406 921 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 AC084121.1-201ENST00000533882 835 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC188H7C350 AC067805.1-201ENST00000559344 470 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC188H7C350 AP002884.5-201ENST00000595053 1132 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 MIR6780B-201ENST00000610307 79 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 AC109583.2-201ENST00000617367 129 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 MIR6839-201ENST00000620425 113 ntBASIC5.67□□□□□ -1.5
CCDC188H7C350 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC188H7C350 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
CCDC188H7C350 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC188H7C350 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC188H7C350 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC188H7C350 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 OR10AB1P-202ENST00000641219 1686 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC188H7C350 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC188H7C350 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC188H7C350 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC188H7C350 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC188H7C350 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC188H7C350 OR9G4-201ENST00000302957 984 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC188H7C350 RNU1-150P-201ENST00000362491 162 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 RNA5SP279-201ENST00000365513 117 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC188H7C350 MIR551A-201ENST00000385042 96 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 TRIM60P17-201ENST00000415181 719 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 AL139158.1-201ENST00000424719 340 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 AC124944.2-201ENST00000429866 1242 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 NDUFS5P5-201ENST00000437256 321 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC188H7C350 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC188H7C350 AC012123.2-201ENST00000485809 248 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 OR9N1P-201ENST00000491296 333 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 RN7SL568P-201ENST00000493069 298 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 RBBP4P1-201ENST00000502424 1276 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms