Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 COX4I1P1-201ENST00000554239 509 ntBASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AC126323.4-201ENST00000566935 234 ntBASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 YWHAQP7-201ENST00000603536 658 ntBASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AL359999.1-201ENST00000604513 294 ntBASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AL161729.2-201ENST00000605700 456 ntBASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 MIR6889-201ENST00000613185 59 ntBASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AC073488.7-201ENST00000633785 778 ntBASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.96□□□□□ -1.14
LIMD1Q9UGP4 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC093311.1-201ENST00000506586 2021 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 GTF2IP1-202ENST00000614592 2047 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 GAPDHP24-201ENST00000328713 983 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 RNY4P34-201ENST00000364779 95 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 U3.14-201ENST00000365363 227 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 Y_RNA.409-201ENST00000383990 98 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AL603766.1-201ENST00000407763 664 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC073264.1-201ENST00000411508 416 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AL596448.1-201ENST00000415024 392 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AL589794.1-201ENST00000424971 390 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 NPM1P22-201ENST00000427761 952 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 RPS7P5-201ENST00000441482 581 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC009244.1-201ENST00000450566 258 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC019080.2-201ENST00000453859 394 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC099563.1-201ENST00000456086 418 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC106872.3-201ENST00000495104 446 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 NIPA2P2-201ENST00000496376 1083 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 RPL7L1P7-201ENST00000509986 724 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 snoU109.5-201ENST00000516231 132 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AL162413.1-201ENST00000603198 110 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AC087283.1-201ENST00000604029 1074 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AL121782.1-201ENST00000611242 413 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 TRIM60P14-201ENST00000513444 1419 ntBASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.95□□□□□ -1.14
LIMD1Q9UGP4 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC131649.2-201ENST00000624925 4439 ntBASIC7.94□□□□□ -1.14
LIMD1Q9UGP4 AC006378.2-201ENST00000623178 2476 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms