Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC006206.1-201ENST00000544842 3387 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 THAP12P5-201ENST00000405864 2275 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 QRSL1P1-201ENST00000400977 1540 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 PPIAP9-201ENST00000403866 498 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC211486.3-201ENST00000412694 621 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL357752.1-201ENST00000412817 349 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL392003.1-201ENST00000434394 243 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL022324.2-201ENST00000434827 780 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 PA2G4P1-201ENST00000442248 1197 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC005077.1-201ENST00000449226 375 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 PRPF38AP1-201ENST00000451976 933 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL133244.1-201ENST00000456007 258 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC093166.4-201ENST00000457867 318 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 RN7SL254P-201ENST00000460609 284 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 RN7SL570P-201ENST00000484405 292 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 RPS27P20-201ENST00000492051 246 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 RN7SL57P-201ENST00000493687 290 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 CSNK1A1P3-201ENST00000504105 330 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC091912.1-201ENST00000511351 248 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 PRMT5P1-201ENST00000514351 598 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 RNU6-319P-201ENST00000516025 108 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC139365.2-201ENST00000517972 253 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC092709.1-201ENST00000521355 1045 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LSM3P2-201ENST00000551246 273 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC092332.1-201ENST00000563684 829 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC096996.1-201ENST00000563813 325 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC004232.2-201ENST00000574245 821 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 MTCYBP13-201ENST00000578634 1093 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 MIR4776-2-201ENST00000580204 80 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC005244.1-201ENST00000582566 339 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 H3F3BP2-201ENST00000583907 357 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL136228.1-201ENST00000622221 319 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AL357140.4-201ENST00000636827 412 ntBASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC3.67□□□□□ -1.82
SND1-IT1Q9HBX3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SND1-IT1Q9HBX3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SND1-IT1Q9HBX3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SND1-IT1Q9HBX3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.66□□□□□ -1.82
SND1-IT1Q9HBX3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SND1-IT1Q9HBX3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC3.66□□□□□ -1.82
SND1-IT1Q9HBX3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SND1-IT1Q9HBX3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms