Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL590762.3-201ENST00000436372 640 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL450996.1-201ENST00000445574 1202 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 RPS3AP53-201ENST00000454716 778 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC108729.1-201ENST00000487812 947 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 RN7SL547P-201ENST00000490793 290 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 RBM22P12-201ENST00000567098 1255 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 MTND4LP25-201ENST00000570218 163 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 BNIP3P27-201ENST00000599991 412 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC063977.5-201ENST00000601044 974 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL359513.1-201ENST00000614364 557 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AP000770.2-201ENST00000623694 100 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AL139254.3-201ENST00000641097 674 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 MAPK10-350ENST00000641777 965 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC235565.1-201ENST00000456962 1325 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
EBF3Q9H4W6 AP004607.3-201ENST00000530354 3915 ntBASIC5.93□□□□□ -1.46
EBF3Q9H4W6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 MTATP6P31-201ENST00000406985 692 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC019205.1-201ENST00000421830 730 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 MTCO2P17-201ENST00000424336 677 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 MTND2P2-201ENST00000434633 945 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AL627308.1-201ENST00000435693 821 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AL645638.1-201ENST00000440519 361 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 MTCYBP11-201ENST00000447254 1109 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AL606490.1-201ENST00000452266 765 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 TVP23BP2-201ENST00000455082 615 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 RANP1-206ENST00000455094 651 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 MORF4L2P1-201ENST00000503761 858 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 OR8X1P-201ENST00000534542 869 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 DPPA3P2-202ENST00000557188 1219 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC096996.1-201ENST00000563813 325 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 FKBP1AP1-201ENST00000594588 318 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC245884.10-201ENST00000597355 337 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC242628.1-201ENST00000606810 391 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC112503.2-201ENST00000609005 552 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AL391834.2-201ENST00000609982 546 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC104307.1-201ENST00000616142 196 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC005840.5-201ENST00000619166 599 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AC004808.2-201ENST00000627965 773 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 C4BPAP1-201ENST00000415474 1893 ntBASIC5.92□□□□□ -1.46
EBF3Q9H4W6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.92□□□□□ -1.46
EBF3Q9H4W6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms