Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AL773545.3-201ENST00000414297 706 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 CCDC58P2-201ENST00000417131 366 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC122718.1-201ENST00000439448 744 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AP000542.1-201ENST00000448473 371 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 RN7SL39P-201ENST00000462264 297 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 FAM133DP-201ENST00000464802 691 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC084024.2-201ENST00000503480 791 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 NPM1P6-201ENST00000521088 871 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 MRPS21P9-201ENST00000571150 257 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 MIR3154-201ENST00000577829 84 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 MTND1P15-201ENST00000579262 949 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC091946.2-201ENST00000606105 291 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AL021368.3-201ENST00000607119 578 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC004067.1-201ENST00000608733 700 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC019131.2-201ENST00000609071 870 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AL592148.2-201ENST00000612210 372 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC022509.4-201ENST00000621404 572 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 MTND4P23-201ENST00000447723 1363 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC079949.2-201ENST00000617117 2933 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 AC127070.3-201ENST00000503695 3263 ntBASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CCDC85AQ96PX6 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC093278.2-201ENST00000564956 2485 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 NCOA4P2-201ENST00000340589 1813 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC020978.6-201ENST00000571197 3177 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 TTC39DP-201ENST00000416781 1688 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 KARSP1-201ENST00000451871 1752 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 SNORA38B-201ENST00000363524 131 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 RNU6-931P-201ENST00000363850 107 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 RNU6-31P-201ENST00000384388 108 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 RPL5P5-201ENST00000392009 893 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 TAF9BP1-201ENST00000396646 746 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 MTCO1P17-201ENST00000411522 491 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 OR6K4P-201ENST00000423179 955 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AL022400.1-201ENST00000423946 935 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 RPL5P34-201ENST00000426545 891 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AL645939.3-201ENST00000435408 225 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 COX4I1P2-201ENST00000447446 547 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AL592447.1-201ENST00000447592 540 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC093392.2-201ENST00000450682 337 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC118758.1-202ENST00000454719 225 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC005017.1-201ENST00000482002 490 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC112484.3-201ENST00000505910 329 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 RPL37P25-201ENST00000507308 276 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC112225.1-201ENST00000508230 297 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 HMGN1P16-201ENST00000508308 283 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 snoZ278.1-201ENST00000517059 112 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 BGLT3-201ENST00000564523 994 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 CYP2C60P-201ENST00000566088 139 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC092718.4-201ENST00000566639 716 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC114477.1-201ENST00000605097 605 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC090186.1-201ENST00000605991 572 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AL592494.3-201ENST00000609485 464 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 MIR7109-201ENST00000613748 65 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC026951.2-201ENST00000613847 241 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms