Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 SNORA51.1-201ENST00000363243 140 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 RNU1-146P-201ENST00000364015 165 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 RN7SKP153-201ENST00000365026 316 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 AC108075.1-201ENST00000424692 529 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 RPL5P2-201ENST00000429598 854 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 RPL7P6-201ENST00000480903 738 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 RPL7P41-201ENST00000485823 957 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 AC015864.1-201ENST00000496512 544 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 IMPA1P1-201ENST00000510718 842 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 MIR4489-201ENST00000578869 62 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 AC069307.1-201ENST00000602820 447 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 MIR6886-201ENST00000619864 61 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 MTCO1P1-201ENST00000624263 1081 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 AC093297.3-201ENST00000607056 2517 ntBASIC4.41□□□□□ -1.7
GAFA1Q96PS6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GAFA1Q96PS6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GAFA1Q96PS6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GAFA1Q96PS6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
GAFA1Q96PS6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GAFA1Q96PS6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GAFA1Q96PS6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
GAFA1Q96PS6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.4□□□□□ -1.7
GAFA1Q96PS6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GAFA1Q96PS6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC005294.1-201ENST00000355509 281 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 OR1L6-202ENST00000373684 1044 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 SNORA48.4-201ENST00000391089 134 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AL354766.1-201ENST00000423396 542 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC093655.2-201ENST00000425735 631 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 NOP56P2-201ENST00000447491 769 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 RPS26P39-201ENST00000469206 341 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 COPS8P2-201ENST00000473228 627 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 RPL15P21-201ENST00000495592 567 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC024558.1-201ENST00000505008 528 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC092709.1-201ENST00000521355 1045 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC009597.2-201ENST00000604659 592 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AL162431.4-201ENST00000604674 411 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC008115.4-201ENST00000619780 775 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC092747.4-201ENST00000620519 1861 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GAFA1Q96PS6 AC023421.1-201ENST00000590535 1785 ntBASIC4.4□□□□□ -1.71
GAFA1Q96PS6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 U3.2-201ENST00000362981 210 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 MIR589-201ENST00000385238 99 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 MIR1286-201ENST00000408112 78 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 SLC35E1P1-201ENST00000419313 864 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 HSPD1P12-201ENST00000429127 1069 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 CLUHP1-201ENST00000435012 1190 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.39□□□□□ -1.71
GAFA1Q96PS6 AL606490.1-201ENST00000452266 765 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 DNAJB5P1-201ENST00000454004 806 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 OR2AF1P-201ENST00000454899 889 ntBASIC4.39□□□□□ -1.71
GAFA1Q96PS6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms