Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AC010632.3-201ENST00000611377 369 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AC138965.3-201ENST00000623875 498 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AC100757.1-201ENST00000616872 1835 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AC079807.1-201ENST00000429993 481 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AC073909.1-201ENST00000447112 999 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 SCARNA16.4-201ENST00000516956 187 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 MIR1273E-201ENST00000581165 102 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AC006272.2-201ENST00000594725 163 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AL022394.1-201ENST00000606979 292 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AL162574.1-201ENST00000615702 950 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AL357153.4-201ENST00000620487 1016 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AL691477.1-201ENST00000624398 162 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 AC109446.4-201ENST00000623235 2755 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.05□□□□□ -1.44
CCDC65Q8IXS2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 RN7SKP15-201ENST00000364742 309 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 CDY17P-201ENST00000414121 1282 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 PCNPP2-201ENST00000441651 455 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AL672138.1-201ENST00000450604 1015 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC144530.1-201ENST00000452862 555 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 RPS27AP2-201ENST00000457576 465 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC091544.1-201ENST00000484702 348 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 SCARNA20.4-201ENST00000516969 131 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC078878.1-201ENST00000539832 958 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 OR11H3P-201ENST00000554547 982 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC022404.1-201ENST00000555320 273 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 MIR3614-201ENST00000581261 86 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AP000769.2-201ENST00000602344 396 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 RNA5SP440-201ENST00000612665 119 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC126175.1-201ENST00000617041 758 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 AC135068.5-201ENST00000624197 983 ntBASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC65Q8IXS2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 TAAR4P-201ENST00000454843 1039 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 AC105420.1-201ENST00000504389 582 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms