Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 MTCO1P11-201ENST00000429111 1528 ntBASIC5.21□□□□□ -1.58
RTL4Q6ZR62 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTL4Q6ZR62 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.21□□□□□ -1.58
RTL4Q6ZR62 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTL4Q6ZR62 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.21□□□□□ -1.58
RTL4Q6ZR62 MUC2-202ENST00000613187 4845 ntBASIC5.21□□□□□ -1.58
RTL4Q6ZR62 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 RN7SKP185-201ENST00000362813 326 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 SNORA51.1-201ENST00000363243 140 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 RPS6P23-201ENST00000413224 722 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AC079355.1-201ENST00000421770 223 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AC023271.1-201ENST00000445936 1090 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 RPS23P9-201ENST00000448848 438 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 RNA5SP362-201ENST00000516048 118 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AC137627.1-201ENST00000545761 289 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 MIR4660-201ENST00000583549 74 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 SOCS5P3-201ENST00000425115 1576 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 AC018809.2-201ENST00000602436 3823 ntBASIC5.2□□□□□ -1.58
RTL4Q6ZR62 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTL4Q6ZR62 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 MTCO1P15-201ENST00000529569 1526 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 OR3A2-201ENST00000408891 1076 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 RNA5SP296-201ENST00000410523 111 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 RNU2-22P-201ENST00000411266 212 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AL133173.1-201ENST00000423458 397 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 PRUNEP1-201ENST00000425846 705 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 RN7SL188P-201ENST00000469842 285 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AGGF1P7-201ENST00000562369 913 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 MIR1273E-201ENST00000581165 102 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AL451049.1-201ENST00000608672 497 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.19□□□□□ -1.58
RTL4Q6ZR62 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTL4Q6ZR62 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RTL4Q6ZR62 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTL4Q6ZR62 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTL4Q6ZR62 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTL4Q6ZR62 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
RTL4Q6ZR62 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.18□□□□□ -1.58
RTL4Q6ZR62 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTL4Q6ZR62 AL078621.3-201ENST00000623707 2042 ntBASIC5.18□□□□□ -1.58
RTL4Q6ZR62 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTL4Q6ZR62 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms