Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC004808.2-201ENST00000627965 773 ntBASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 AC235565.1-201ENST00000456962 1325 ntBASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 AL929601.4-201ENST00000613011 1341 ntBASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 AC007342.5-201ENST00000571340 2142 ntBASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.15□□□□□ -1.59
H3F3CQ6NXT2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 AL158152.1-201ENST00000602652 1435 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 OR9K1P-202ENST00000641111 3217 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 RNU6-673P-201ENST00000365084 104 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 RNA5SP187-201ENST00000384400 119 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 AC007161.1-204ENST00000423039 460 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 MGAT2P2-201ENST00000427194 797 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 KRT8P51-201ENST00000438938 274 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 OR2AO1P-201ENST00000476497 403 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 AC024558.1-201ENST00000505008 528 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 AC111000.5-201ENST00000506559 1178 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 RFPL4AP3-201ENST00000515267 345 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 AC125612.1-201ENST00000547580 377 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 MIR1269B-201ENST00000580405 75 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 H3F3BP2-201ENST00000583907 357 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 OR51C1P-201ENST00000608504 942 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 AC010266.2-201ENST00000564741 3255 ntBASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.14□□□□□ -1.59
H3F3CQ6NXT2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 NAMPTP1-201ENST00000440465 2514 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AL158827.1-201ENST00000416300 391 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AL034379.1-201ENST00000423216 253 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 RPS27AP6-201ENST00000427962 448 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AL627308.1-201ENST00000435693 821 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 NANOGP9-201ENST00000439890 892 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AL606490.1-201ENST00000452266 765 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 RPL12P39-201ENST00000455456 496 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 ATP5LP5-201ENST00000483050 299 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 MORF4L2P1-201ENST00000503761 858 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 RN7SKP253-201ENST00000516424 309 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 PMS2P3-207ENST00000529061 717 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC078878.1-201ENST00000539832 958 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC137627.1-201ENST00000545761 289 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC013244.1-201ENST00000604279 193 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AL451049.1-201ENST00000608672 497 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 AC000068.2-201ENST00000608816 460 ntBASIC5.13□□□□□ -1.59
H3F3CQ6NXT2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms