Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC112484.3-201ENST00000505910 329 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AL078601.3-201ENST00000573303 535 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC011500.1-201ENST00000601963 469 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC009779.8-202ENST00000607990 932 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AL451049.1-201ENST00000608672 497 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC079776.5-201ENST00000641920 211 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC002525.1-201ENST00000624392 1622 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 OR10R3P-201ENST00000361688 942 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 RN7SKP250-201ENST00000363924 321 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 THEM7P-201ENST00000419556 672 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC108479.1-201ENST00000431142 427 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 BX119904.1-201ENST00000432026 348 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL158053.1-201ENST00000441503 453 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 NPM1P19-201ENST00000450070 712 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 RSU1P1-201ENST00000453416 441 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC092902.1-201ENST00000486999 259 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 AP002453.1-201ENST00000492327 668 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC113367.2-201ENST00000505749 160 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 CR383658.1-201ENST00000514609 734 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC019227.1-201ENST00000526902 510 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 AP004609.2-201ENST00000532177 190 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC007346.2-201ENST00000564816 892 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC060780.2-201ENST00000589047 198 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL356274.1-201ENST00000617064 410 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 AL512652.1-201ENST00000619006 500 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 MRRFP1-201ENST00000435941 1675 ntBASIC6.09□□□□□ -1.43
CCDC38Q502W7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CCDC38Q502W7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC38Q502W7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.09□□□□□ -1.44
CCDC38Q502W7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.09□□□□□ -1.44
CCDC38Q502W7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.09□□□□□ -1.44
CCDC38Q502W7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC38Q502W7 SNORA21-201ENST00000362423 132 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 SNORA63.3-201ENST00000362682 132 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 RNU1-134P-201ENST00000362935 165 ntBASIC6.08□□□□□ -1.44
CCDC38Q502W7 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC38Q502W7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms