Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNA5SP77-201ENST00000365394 120 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CKS1BP61024 LAP3P1-201ENST00000403648 294 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 NCSTNP1-201ENST00000406229 144 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS1BP61024 RN7SKP125-201ENST00000410481 302 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC3.9□□□□□ -1.79
CKS1BP61024 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC3.9□□□□□ -1.79
CKS1BP61024 OR6E1P-201ENST00000414424 923 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 OR10T1P-201ENST00000424327 947 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 KCTD9P1-201ENST00000430462 1167 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CKS1BP61024 RPS7P3-201ENST00000443360 580 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 FTLP8-201ENST00000446770 267 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS1BP61024 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 AC133473.1-201ENST00000455173 299 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 AC092865.4-201ENST00000477936 615 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 AC114324.2-202ENST00000503812 134 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 RNA5SP434-201ENST00000516647 121 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS1BP61024 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS1BP61024 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 GARSP1-201ENST00000570895 719 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC3.9□□□□□ -1.79
CKS1BP61024 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC3.9□□□□□ -1.79
CKS1BP61024 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS1BP61024 MIR6070-201ENST00000613967 103 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 SAMMSON-209ENST00000641222 1100 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.9□□□□□ -1.79
CKS1BP61024 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CKS1BP61024 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC114947.2-201ENST00000565748 2125 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 CPS1-IT1-201ENST00000628368 2306 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CKS1BP61024 DDX18P4-201ENST00000511690 1966 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 MAPK10-303ENST00000641324 3959 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.89□□□□□ -1.79
CKS1BP61024 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CKS1BP61024 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 SNORA21-201ENST00000362423 132 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 RPA3-204ENST00000406109 434 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS1BP61024 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS1BP61024 MEAF6P1-201ENST00000416092 327 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 RPS4XP5-201ENST00000419038 768 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC3.89□□□□□ -1.79
CKS1BP61024 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC242426.1-201ENST00000435270 960 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 OR52E3P-201ENST00000452083 936 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 RPL12P30-201ENST00000488389 499 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CKS1BP61024 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC3.89□□□□□ -1.79
CKS1BP61024 RN7SKP34-201ENST00000516142 244 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 SNORA74.1-201ENST00000516320 180 ntBASIC3.89□□□□□ -1.79
CKS1BP61024 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC3.89□□□□□ -1.79
CKS1BP61024 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC3.89□□□□□ -1.79
CKS1BP61024 AC090819.1-201ENST00000523800 1111 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms