Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.25□□□□□ -1.57
VSX2P58304 MIR6826-201ENST00000617808 98 ntBASIC5.25□□□□□ -1.57
VSX2P58304 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VSX2P58304 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.25□□□□□ -1.57
VSX2P58304 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.25□□□□□ -1.57
VSX2P58304 GVINP1-202ENST00000531871 7271 ntBASIC5.25□□□□□ -1.57
VSX2P58304 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.25□□□□□ -1.57
VSX2P58304 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
VSX2P58304 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VSX2P58304 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.24□□□□□ -1.57
VSX2P58304 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.24□□□□□ -1.57
VSX2P58304 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.24□□□□□ -1.57
VSX2P58304 AC009804.1-201ENST00000400949 179 ntBASIC5.24□□□□□ -1.57
VSX2P58304 MARK2P12-201ENST00000420129 585 ntBASIC5.24□□□□□ -1.57
VSX2P58304 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.24□□□□□ -1.57
VSX2P58304 CFL1P1-202ENST00000432948 411 ntBASIC5.24□□□□□ -1.57
VSX2P58304 CYCSP6-201ENST00000434498 302 ntBASIC5.24□□□□□ -1.57
VSX2P58304 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.24□□□□□ -1.57
VSX2P58304 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.24□□□□□ -1.57
VSX2P58304 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.24□□□□□ -1.57
VSX2P58304 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.24□□□□□ -1.57
VSX2P58304 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.24□□□□□ -1.57
VSX2P58304 RN7SL177P-201ENST00000476596 299 ntBASIC5.24□□□□□ -1.57
VSX2P58304 RNU6-964P-201ENST00000516524 69 ntBASIC5.24□□□□□ -1.57
VSX2P58304 SCARNA16.4-201ENST00000516956 187 ntBASIC5.24□□□□□ -1.57
VSX2P58304 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.24□□□□□ -1.57
VSX2P58304 OR8Q1P-201ENST00000526467 655 ntBASIC5.24□□□□□ -1.57
VSX2P58304 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.24□□□□□ -1.57
VSX2P58304 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.24□□□□□ -1.57
VSX2P58304 AC090022.1-201ENST00000546569 311 ntBASIC5.24□□□□□ -1.57
VSX2P58304 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.24□□□□□ -1.57
VSX2P58304 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.24□□□□□ -1.57
VSX2P58304 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 MIR3176-201ENST00000582210 90 ntBASIC5.24□□□□□ -1.57
VSX2P58304 AC010487.1-201ENST00000594408 1172 ntBASIC5.24□□□□□ -1.57
VSX2P58304 AC000068.2-201ENST00000608816 460 ntBASIC5.24□□□□□ -1.57
VSX2P58304 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.24□□□□□ -1.57
VSX2P58304 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
VSX2P58304 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
VSX2P58304 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.24□□□□□ -1.57
VSX2P58304 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.24□□□□□ -1.57
VSX2P58304 AL022311.1-201ENST00000623726 19416 ntBASIC5.24□□□□□ -1.57
VSX2P58304 AC068870.3-201ENST00000625077 2536 ntBASIC5.24□□□□□ -1.57
VSX2P58304 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VSX2P58304 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VSX2P58304 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
VSX2P58304 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VSX2P58304 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.23□□□□□ -1.57
VSX2P58304 RPL35AP24-201ENST00000413846 330 ntBASIC5.23□□□□□ -1.57
VSX2P58304 AL158827.1-201ENST00000416300 391 ntBASIC5.23□□□□□ -1.57
VSX2P58304 GTF3AP1-201ENST00000416942 1004 ntBASIC5.23□□□□□ -1.57
VSX2P58304 RIMKLBP2-201ENST00000424737 654 ntBASIC5.23□□□□□ -1.57
VSX2P58304 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.23□□□□□ -1.57
VSX2P58304 CYCSP12-201ENST00000437729 300 ntBASIC5.23□□□□□ -1.57
VSX2P58304 AL161722.1-201ENST00000446972 1032 ntBASIC5.23□□□□□ -1.57
VSX2P58304 AC105399.1-202ENST00000447303 205 ntBASIC5.23□□□□□ -1.57
VSX2P58304 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.23□□□□□ -1.57
VSX2P58304 RPL7P45-201ENST00000455851 743 ntBASIC5.23□□□□□ -1.57
VSX2P58304 DEFB109A-201ENST00000482450 265 ntBASIC5.23□□□□□ -1.57
VSX2P58304 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.23□□□□□ -1.57
VSX2P58304 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.23□□□□□ -1.57
VSX2P58304 MTND6P2-201ENST00000512226 524 ntBASIC5.23□□□□□ -1.57
VSX2P58304 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.23□□□□□ -1.57
VSX2P58304 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.23□□□□□ -1.57
VSX2P58304 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.23□□□□□ -1.57
VSX2P58304 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.23□□□□□ -1.57
VSX2P58304 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.23□□□□□ -1.57
VSX2P58304 FKBP1AP1-201ENST00000594588 318 ntBASIC5.23□□□□□ -1.57
VSX2P58304 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.23□□□□□ -1.57
VSX2P58304 AL512624.1-201ENST00000613638 469 ntBASIC5.23□□□□□ -1.57
VSX2P58304 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.23□□□□□ -1.57
VSX2P58304 SAMMSON-209ENST00000641222 1100 ntBASIC5.23□□□□□ -1.57
VSX2P58304 AC079776.5-201ENST00000641920 211 ntBASIC5.23□□□□□ -1.57
VSX2P58304 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VSX2P58304 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VSX2P58304 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms