Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.08□□□□□ -1.76
CMC4P56277 RNA5SP453-201ENST00000362503 119 ntBASIC4.08□□□□□ -1.76
CMC4P56277 RN7SKP185-201ENST00000362813 326 ntBASIC4.08□□□□□ -1.76
CMC4P56277 RNA5SP132-201ENST00000364725 118 ntBASIC4.08□□□□□ -1.76
CMC4P56277 RN7SKP153-201ENST00000365026 316 ntBASIC4.08□□□□□ -1.76
CMC4P56277 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 AC009804.1-201ENST00000400949 179 ntBASIC4.08□□□□□ -1.76
CMC4P56277 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 AL354868.1-201ENST00000417077 482 ntBASIC4.08□□□□□ -1.76
CMC4P56277 AL590399.4-201ENST00000436561 601 ntBASIC4.08□□□□□ -1.76
CMC4P56277 MRPS21P3-201ENST00000436696 262 ntBASIC4.08□□□□□ -1.76
CMC4P56277 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.08□□□□□ -1.76
CMC4P56277 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC4.08□□□□□ -1.76
CMC4P56277 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 OR52Y1P-201ENST00000452418 828 ntBASIC4.08□□□□□ -1.76
CMC4P56277 RPL12P24-201ENST00000474907 486 ntBASIC4.08□□□□□ -1.76
CMC4P56277 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 AC108693.1-201ENST00000496068 432 ntBASIC4.08□□□□□ -1.76
CMC4P56277 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.08□□□□□ -1.76
CMC4P56277 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.08□□□□□ -1.76
CMC4P56277 AC109464.1-201ENST00000511091 819 ntBASIC4.08□□□□□ -1.76
CMC4P56277 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 RNU6-943P-201ENST00000516960 98 ntBASIC4.08□□□□□ -1.76
CMC4P56277 IGKV2-19-201ENST00000518132 283 ntBASIC4.08□□□□□ -1.76
CMC4P56277 KCTD9P6-201ENST00000522306 950 ntBASIC4.08□□□□□ -1.76
CMC4P56277 HMGB1P40-201ENST00000525121 540 ntBASIC4.08□□□□□ -1.76
CMC4P56277 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.08□□□□□ -1.76
CMC4P56277 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.08□□□□□ -1.76
CMC4P56277 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.08□□□□□ -1.76
CMC4P56277 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.08□□□□□ -1.76
CMC4P56277 AL713998.2-201ENST00000604538 1198 ntBASIC4.08□□□□□ -1.76
CMC4P56277 AC007938.2-201ENST00000604666 2634 ntBASIC4.08□□□□□ -1.76
CMC4P56277 AL022394.1-201ENST00000606979 292 ntBASIC4.08□□□□□ -1.76
CMC4P56277 AL118522.2-201ENST00000616045 615 ntBASIC4.08□□□□□ -1.76
CMC4P56277 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.08□□□□□ -1.76
CMC4P56277 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CMC4P56277 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 AC025470.1-201ENST00000510053 2032 ntBASIC4.07□□□□□ -1.76
CMC4P56277 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CMC4P56277 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CMC4P56277 RNA5SP326-201ENST00000363209 110 ntBASIC4.07□□□□□ -1.76
CMC4P56277 RNU6-167P-201ENST00000384292 106 ntBASIC4.07□□□□□ -1.76
CMC4P56277 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 AL512422.1-201ENST00000407033 553 ntBASIC4.07□□□□□ -1.76
CMC4P56277 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 AL133325.1-201ENST00000421090 382 ntBASIC4.07□□□□□ -1.76
CMC4P56277 OR5W1P-201ENST00000423705 938 ntBASIC4.07□□□□□ -1.76
CMC4P56277 AC093655.2-201ENST00000425735 631 ntBASIC4.07□□□□□ -1.76
CMC4P56277 FAM96AP1-201ENST00000430879 482 ntBASIC4.07□□□□□ -1.76
CMC4P56277 AL161722.2-201ENST00000434731 981 ntBASIC4.07□□□□□ -1.76
CMC4P56277 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CMC4P56277 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 AC019185.1-201ENST00000442718 389 ntBASIC4.07□□□□□ -1.76
CMC4P56277 AL451063.1-201ENST00000450164 1133 ntBASIC4.07□□□□□ -1.76
CMC4P56277 AC079168.1-201ENST00000458741 345 ntBASIC4.07□□□□□ -1.76
CMC4P56277 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 RPL5P16-201ENST00000471467 790 ntBASIC4.07□□□□□ -1.76
CMC4P56277 AC092754.1-201ENST00000472975 479 ntBASIC4.07□□□□□ -1.76
CMC4P56277 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CMC4P56277 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.07□□□□□ -1.76
CMC4P56277 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.07□□□□□ -1.76
CMC4P56277 AL049779.2-201ENST00000553847 315 ntBASIC4.07□□□□□ -1.76
CMC4P56277 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.07□□□□□ -1.76
CMC4P56277 NPM1P5-201ENST00000557228 838 ntBASIC4.07□□□□□ -1.76
CMC4P56277 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.07□□□□□ -1.76
CMC4P56277 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.07□□□□□ -1.76
CMC4P56277 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms