Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC093311.1-201ENST00000506586 2021 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 SNORA43.1-201ENST00000364863 140 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SUMO3P55854 MTCO1P56-201ENST00000401674 224 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 VPS26BP1-201ENST00000417155 755 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 THEM7P-201ENST00000419556 672 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 RPL7AP14-201ENST00000424041 802 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC022022.1-201ENST00000430304 178 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 CETN4P-201ENST00000432407 469 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AC013403.1-201ENST00000436954 263 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC002542.1-201ENST00000440683 193 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.67□□□□□ -1.5
SUMO3P55854 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.67□□□□□ -1.5
SUMO3P55854 RPS27AP3-201ENST00000453803 454 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 OR2AF1P-201ENST00000454899 889 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AL133351.3-201ENST00000454998 193 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 RNU7-27P-201ENST00000459281 62 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 RN7SL552P-201ENST00000462094 276 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AL157777.1-201ENST00000468100 304 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 MARK2P8-201ENST00000476069 952 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AC044810.1-201ENST00000480271 711 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 MTND4LP2-201ENST00000502312 285 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AC010627.1-201ENST00000503819 1294 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC083923.1-201ENST00000523708 376 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.67□□□□□ -1.5
SUMO3P55854 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 AC122134.1-201ENST00000565664 1104 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 AC113368.1-201ENST00000603736 382 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.67□□□□□ -1.5
SUMO3P55854 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SUMO3P55854 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.67□□□□□ -1.5
SUMO3P55854 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.67□□□□□ -1.5
SUMO3P55854 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 HDAC1P2-201ENST00000453661 1398 ntBASIC5.67□□□□□ -1.5
SUMO3P55854 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 AOX3P-204ENST00000491025 2107 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
SUMO3P55854 AC096921.2-201ENST00000561507 1916 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 AL359976.1-201ENST00000418655 3528 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SUMO3P55854 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SUMO3P55854 RNU4-28P-201ENST00000364739 141 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.66□□□□□ -1.5
SUMO3P55854 RNU6-224P-201ENST00000384055 107 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 Y_RNA.578-201ENST00000390903 88 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.66□□□□□ -1.5
SUMO3P55854 TMA16P2-201ENST00000413187 601 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.66□□□□□ -1.5
SUMO3P55854 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.66□□□□□ -1.5
SUMO3P55854 RPL7P29-201ENST00000437151 728 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.66□□□□□ -1.5
SUMO3P55854 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.66□□□□□ -1.5
SUMO3P55854 ARL5AP2-201ENST00000444698 533 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.66□□□□□ -1.5
SUMO3P55854 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.66□□□□□ -1.5
SUMO3P55854 RPL7P40-201ENST00000481703 745 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 AC104687.1-201ENST00000485829 412 ntBASIC5.66□□□□□ -1.5
SUMO3P55854 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SUMO3P55854 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms