Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 EXOSC3P1-201ENST00000448649 500 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXG1P55316 RPL7P61-201ENST00000451721 751 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 VN1R40P-201ENST00000455196 941 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 ACA64.1-201ENST00000459171 127 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 SNORD11.1-201ENST00000459482 85 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AL157777.1-201ENST00000468100 304 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 RPL38P3-201ENST00000484463 213 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXG1P55316 AC010486.3-201ENST00000511602 785 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.2□□□□□ -1.58
FOXG1P55316 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXG1P55316 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXG1P55316 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
FOXG1P55316 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXG1P55316 AC244502.2-201ENST00000543361 851 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AL356801.1-201ENST00000559320 294 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 GARSP1-201ENST00000570895 719 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXG1P55316 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
FOXG1P55316 AC008536.1-201ENST00000602872 669 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 RPP40P2-201ENST00000603596 712 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AC100767.2-201ENST00000604840 693 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AL365400.2-201ENST00000605604 902 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AL136131.3-201ENST00000607600 188 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 AC068792.1-201ENST00000621354 417 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AC068880.4-201ENST00000623082 495 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AP001962.1-201ENST00000624114 559 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 AC006927.2-201ENST00000639256 389 ntBASIC5.2□□□□□ -1.58
FOXG1P55316 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
FOXG1P55316 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXG1P55316 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
FOXG1P55316 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXG1P55316 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXG1P55316 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXG1P55316 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXG1P55316 AL442128.2-201ENST00000620246 1824 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXG1P55316 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
FOXG1P55316 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXG1P55316 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
FOXG1P55316 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXG1P55316 ATP5F1P2-201ENST00000398143 760 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 MRPL53P1-201ENST00000414323 319 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXG1P55316 AL158827.1-201ENST00000416300 391 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 MTND2P5-201ENST00000432656 1006 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AL663074.2-201ENST00000440621 479 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXG1P55316 AC073109.1-201ENST00000445066 978 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXG1P55316 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
FOXG1P55316 AL358876.1-201ENST00000453364 1075 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 USP9YP10-201ENST00000454868 628 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AC084754.1-201ENST00000463466 464 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXG1P55316 AL122020.1-201ENST00000472287 459 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AL355032.1-201ENST00000472981 438 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AC090589.1-201ENST00000473109 362 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 RN7SL57P-201ENST00000493687 290 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXG1P55316 AC010468.3-201ENST00000508225 458 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AC121161.1-201ENST00000510606 652 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXG1P55316 USP9YP5-201ENST00000511770 630 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.19□□□□□ -1.58
FOXG1P55316 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXG1P55316 RNA5SP271-201ENST00000516700 88 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXG1P55316 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXG1P55316 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXG1P55316 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXG1P55316 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXG1P55316 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.19□□□□□ -1.58
FOXG1P55316 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXG1P55316 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXG1P55316 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXG1P55316 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.19□□□□□ -1.58
FOXG1P55316 AL132857.1-201ENST00000555180 708 ntBASIC5.19□□□□□ -1.58
FOXG1P55316 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXG1P55316 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXG1P55316 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXG1P55316 AC117490.2-201ENST00000610042 594 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms