Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNORA70.13-201ENST00000516116 138 ntBASIC5.47□□□□□ -1.53
CDH13P55290 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH13P55290 OR4A17P-201ENST00000526032 904 ntBASIC5.47□□□□□ -1.53
CDH13P55290 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH13P55290 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CDH13P55290 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH13P55290 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH13P55290 AL359091.2-201ENST00000609303 556 ntBASIC5.47□□□□□ -1.53
CDH13P55290 RMST_5.1-201ENST00000618704 126 ntBASIC5.47□□□□□ -1.53
CDH13P55290 AC015722.2-201ENST00000622210 551 ntBASIC5.47□□□□□ -1.53
CDH13P55290 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDH13P55290 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH13P55290 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH13P55290 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH13P55290 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.46□□□□□ -1.53
CDH13P55290 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH13P55290 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CDH13P55290 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.46□□□□□ -1.53
CDH13P55290 AC006206.1-201ENST00000544842 3387 ntBASIC5.46□□□□□ -1.53
CDH13P55290 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH13P55290 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 SNORA27.3-201ENST00000364937 134 ntBASIC5.46□□□□□ -1.54
CDH13P55290 RN7SKP69-201ENST00000365390 305 ntBASIC5.46□□□□□ -1.54
CDH13P55290 RNA5SP30-201ENST00000365552 115 ntBASIC5.46□□□□□ -1.54
CDH13P55290 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CDH13P55290 SNORD65-201ENST00000391079 73 ntBASIC5.46□□□□□ -1.54
CDH13P55290 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 PEX12P1-201ENST00000400284 1048 ntBASIC5.46□□□□□ -1.54
CDH13P55290 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH13P55290 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH13P55290 GLUD1P9-201ENST00000420997 1173 ntBASIC5.46□□□□□ -1.54
CDH13P55290 RNF19BPX-201ENST00000426224 625 ntBASIC5.46□□□□□ -1.54
CDH13P55290 HMGB3P24-201ENST00000433260 622 ntBASIC5.46□□□□□ -1.54
CDH13P55290 ZFAND6P1-201ENST00000434138 605 ntBASIC5.46□□□□□ -1.54
CDH13P55290 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH13P55290 AC110602.1-201ENST00000437414 318 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH13P55290 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 RPS15AP29-201ENST00000445539 400 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AL596266.1-201ENST00000448132 400 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AL157884.3-201ENST00000448273 1184 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 AC104629.2-201ENST00000468627 598 ntBASIC5.46□□□□□ -1.54
CDH13P55290 ATP5LP5-201ENST00000483050 299 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 AC025458.1-201ENST00000506046 166 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AC011853.1-201ENST00000518911 454 ntBASIC5.46□□□□□ -1.54
CDH13P55290 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH13P55290 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH13P55290 PMS2P3-207ENST00000529061 717 ntBASIC5.46□□□□□ -1.54
CDH13P55290 TRIM51DP-201ENST00000529746 596 ntBASIC5.46□□□□□ -1.54
CDH13P55290 OR5AM1P-201ENST00000532136 1032 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 AC068305.2-201ENST00000550567 1205 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AC092868.3-201ENST00000560515 784 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AC026826.3-201ENST00000561747 158 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH13P55290 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 AC027216.1-201ENST00000577726 685 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH13P55290 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH13P55290 MIR6889-201ENST00000613185 59 ntBASIC5.46□□□□□ -1.54
CDH13P55290 AL158062.1-201ENST00000619632 745 ntBASIC5.46□□□□□ -1.54
CDH13P55290 LINC00216-201ENST00000623548 1126 ntBASIC5.46□□□□□ -1.54
CDH13P55290 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH13P55290 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CDH13P55290 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CDH13P55290 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CDH13P55290 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH13P55290 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH13P55290 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH13P55290 AP001029.2-203ENST00000589795 4910 ntBASIC5.45□□□□□ -1.54
CDH13P55290 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH13P55290 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH13P55290 GVINP1-202ENST00000531871 7271 ntBASIC5.45□□□□□ -1.54
CDH13P55290 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH13P55290 MRE11P1-201ENST00000464884 2127 ntBASIC5.45□□□□□ -1.54
CDH13P55290 AC068870.3-201ENST00000625077 2536 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms