Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 PEX12P1-201ENST00000400284 1048 ntBASIC5.62□□□□□ -1.51
CDH6P55285 DBIP1-201ENST00000401435 260 ntBASIC5.62□□□□□ -1.51
CDH6P55285 RNU6-233P-201ENST00000410845 141 ntBASIC5.62□□□□□ -1.51
CDH6P55285 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH6P55285 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH6P55285 RPL12P17-201ENST00000432393 498 ntBASIC5.62□□□□□ -1.51
CDH6P55285 GSTM5P1-201ENST00000434751 660 ntBASIC5.62□□□□□ -1.51
CDH6P55285 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.62□□□□□ -1.51
CDH6P55285 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDH6P55285 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH6P55285 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH6P55285 CDC42P3-201ENST00000518493 633 ntBASIC5.62□□□□□ -1.51
CDH6P55285 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH6P55285 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.62□□□□□ -1.51
CDH6P55285 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH6P55285 AC022404.1-201ENST00000555320 273 ntBASIC5.62□□□□□ -1.51
CDH6P55285 AC015720.2-201ENST00000567709 334 ntBASIC5.62□□□□□ -1.51
CDH6P55285 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH6P55285 AC244107.2-201ENST00000611773 76 ntBASIC5.62□□□□□ -1.51
CDH6P55285 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH6P55285 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CDH6P55285 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CDH6P55285 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH6P55285 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH6P55285 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CDH6P55285 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDH6P55285 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDH6P55285 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CDH6P55285 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH6P55285 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CDH6P55285 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDH6P55285 AL391422.1-201ENST00000402155 436 ntBASIC5.61□□□□□ -1.51
CDH6P55285 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 SRSF1P1-201ENST00000424058 520 ntBASIC5.61□□□□□ -1.51
CDH6P55285 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH6P55285 AL390119.1-201ENST00000440329 312 ntBASIC5.61□□□□□ -1.51
CDH6P55285 AP000281.1-201ENST00000444036 316 ntBASIC5.61□□□□□ -1.51
CDH6P55285 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH6P55285 AL672138.1-201ENST00000450604 1015 ntBASIC5.61□□□□□ -1.51
CDH6P55285 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH6P55285 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH6P55285 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH6P55285 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH6P55285 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH6P55285 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH6P55285 AL356608.1-201ENST00000610034 820 ntBASIC5.61□□□□□ -1.51
CDH6P55285 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 AL078621.3-201ENST00000623707 2042 ntBASIC5.61□□□□□ -1.51
CDH6P55285 AC099654.6-201ENST00000636487 512 ntBASIC5.61□□□□□ -1.51
CDH6P55285 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CDH6P55285 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH6P55285 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDH6P55285 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH6P55285 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH6P55285 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH6P55285 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH6P55285 KARSP1-201ENST00000451871 1752 ntBASIC5.6□□□□□ -1.51
CDH6P55285 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH6P55285 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH6P55285 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH6P55285 GABARAPL3-201ENST00000412799 354 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AC017019.1-201ENST00000426129 261 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH6P55285 RPL7AP49-201ENST00000429522 581 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AL591438.1-201ENST00000433508 581 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AC105399.1-202ENST00000447303 205 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AC108751.3-201ENST00000461814 1020 ntBASIC5.6□□□□□ -1.51
CDH6P55285 RN7SL51P-201ENST00000468230 285 ntBASIC5.6□□□□□ -1.51
CDH6P55285 RPL7P51-201ENST00000490532 749 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH6P55285 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 HMGB1P44-201ENST00000508597 572 ntBASIC5.6□□□□□ -1.51
CDH6P55285 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH6P55285 AC130364.2-201ENST00000528639 604 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AP004607.2-201ENST00000533949 322 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AC027544.3-201ENST00000535082 757 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH6P55285 RN7SL290P-201ENST00000578661 300 ntBASIC5.6□□□□□ -1.51
CDH6P55285 RN7SL356P-201ENST00000582228 248 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AC010487.1-201ENST00000594408 1172 ntBASIC5.6□□□□□ -1.51
CDH6P55285 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH6P55285 AC104695.2-201ENST00000605056 775 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms