Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL132875.1-201ENST00000403623 949 ntBASIC6.22□□□□□ -1.41
NEK3P51956 RN7SKP222-201ENST00000410651 315 ntBASIC6.22□□□□□ -1.41
NEK3P51956 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.22□□□□□ -1.41
NEK3P51956 MRPL50P1-201ENST00000431951 384 ntBASIC6.22□□□□□ -1.41
NEK3P51956 MTCO1P52-201ENST00000433928 531 ntBASIC6.22□□□□□ -1.41
NEK3P51956 AL731534.1-201ENST00000434711 269 ntBASIC6.22□□□□□ -1.41
NEK3P51956 RPL12P11-201ENST00000439970 501 ntBASIC6.22□□□□□ -1.41
NEK3P51956 RNF2P1-201ENST00000442955 1010 ntBASIC6.22□□□□□ -1.41
NEK3P51956 RPL7P33-201ENST00000444159 742 ntBASIC6.22□□□□□ -1.41
NEK3P51956 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 AC073594.1-201ENST00000462065 364 ntBASIC6.22□□□□□ -1.41
NEK3P51956 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.22□□□□□ -1.41
NEK3P51956 AC023194.2-201ENST00000465398 406 ntBASIC6.22□□□□□ -1.41
NEK3P51956 TPT1P3-201ENST00000492841 512 ntBASIC6.22□□□□□ -1.41
NEK3P51956 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 PPM1AP1-201ENST00000502740 1135 ntBASIC6.22□□□□□ -1.41
NEK3P51956 AL158068.1-201ENST00000506116 616 ntBASIC6.22□□□□□ -1.41
NEK3P51956 MTCO3P27-201ENST00000514397 196 ntBASIC6.22□□□□□ -1.41
NEK3P51956 CR383658.1-201ENST00000514609 734 ntBASIC6.22□□□□□ -1.41
NEK3P51956 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.22□□□□□ -1.41
NEK3P51956 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
NEK3P51956 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.22□□□□□ -1.41
NEK3P51956 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.22□□□□□ -1.41
NEK3P51956 AC092865.1-201ENST00000544395 1023 ntBASIC6.22□□□□□ -1.41
NEK3P51956 AC090826.1-203ENST00000569235 490 ntBASIC6.22□□□□□ -1.41
NEK3P51956 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.22□□□□□ -1.41
NEK3P51956 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.22□□□□□ -1.41
NEK3P51956 AC020916.2-201ENST00000591242 360 ntBASIC6.22□□□□□ -1.41
NEK3P51956 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.22□□□□□ -1.41
NEK3P51956 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 AC026741.1-201ENST00000605892 482 ntBASIC6.22□□□□□ -1.41
NEK3P51956 AP005229.2-201ENST00000609980 697 ntBASIC6.22□□□□□ -1.41
NEK3P51956 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 AL359742.1-201ENST00000622497 540 ntBASIC6.22□□□□□ -1.41
NEK3P51956 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.22□□□□□ -1.41
NEK3P51956 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
NEK3P51956 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NEK3P51956 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.22□□□□□ -1.41
NEK3P51956 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NEK3P51956 AL359955.1-201ENST00000455242 3275 ntBASIC6.21□□□□□ -1.41
NEK3P51956 GTF2IP4-201ENST00000453092 2054 ntBASIC6.21□□□□□ -1.41
NEK3P51956 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NEK3P51956 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 METTL21EP-201ENST00000298105 713 ntBASIC6.21□□□□□ -1.42
NEK3P51956 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 MIR130B-202ENST00000385018 82 ntBASIC6.21□□□□□ -1.42
NEK3P51956 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NEK3P51956 AL355143.1-201ENST00000407101 841 ntBASIC6.21□□□□□ -1.42
NEK3P51956 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.21□□□□□ -1.42
NEK3P51956 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.21□□□□□ -1.42
NEK3P51956 AC008173.1-201ENST00000418901 264 ntBASIC6.21□□□□□ -1.42
NEK3P51956 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.21□□□□□ -1.42
NEK3P51956 EIF4A1P1-201ENST00000420241 934 ntBASIC6.21□□□□□ -1.42
NEK3P51956 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.21□□□□□ -1.42
NEK3P51956 AL590399.2-201ENST00000427536 309 ntBASIC6.21□□□□□ -1.42
NEK3P51956 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 AC079807.1-201ENST00000429993 481 ntBASIC6.21□□□□□ -1.42
NEK3P51956 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.21□□□□□ -1.42
NEK3P51956 AP000936.3-201ENST00000438127 255 ntBASIC6.21□□□□□ -1.42
NEK3P51956 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.21□□□□□ -1.42
NEK3P51956 EIF5AP4-201ENST00000441206 465 ntBASIC6.21□□□□□ -1.42
NEK3P51956 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.21□□□□□ -1.42
NEK3P51956 AC097499.1-201ENST00000444277 208 ntBASIC6.21□□□□□ -1.42
NEK3P51956 GAPDHP23-201ENST00000444823 993 ntBASIC6.21□□□□□ -1.42
NEK3P51956 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.21□□□□□ -1.42
NEK3P51956 AC094085.1-201ENST00000468914 584 ntBASIC6.21□□□□□ -1.42
NEK3P51956 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
NEK3P51956 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 AC027369.2-201ENST00000528030 440 ntBASIC6.21□□□□□ -1.42
NEK3P51956 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.21□□□□□ -1.42
NEK3P51956 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.21□□□□□ -1.42
NEK3P51956 AC244502.2-201ENST00000543361 851 ntBASIC6.21□□□□□ -1.42
NEK3P51956 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 NPM1P42-201ENST00000560329 862 ntBASIC6.21□□□□□ -1.42
NEK3P51956 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 AC126365.2-201ENST00000580630 379 ntBASIC6.21□□□□□ -1.42
NEK3P51956 MIR132-201ENST00000591554 101 ntBASIC6.21□□□□□ -1.42
NEK3P51956 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.21□□□□□ -1.42
NEK3P51956 AC067773.1-201ENST00000603284 1094 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms