Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USP11P51784 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.35□□□□□ -1.23
USP11P51784 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
USP11P51784 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.35□□□□□ -1.23
USP11P51784 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USP11P51784 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USP11P51784 AL158152.1-201ENST00000602652 1435 ntBASIC7.35□□□□□ -1.23
USP11P51784 AC009831.5-201ENST00000624000 3189 ntBASIC7.34□□□□□ -1.23
USP11P51784 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.34□□□□□ -1.23
USP11P51784 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.34□□□□□ -1.23
USP11P51784 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
USP11P51784 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.34□□□□□ -1.23
USP11P51784 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.34□□□□□ -1.23
USP11P51784 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
USP11P51784 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
USP11P51784 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
USP11P51784 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 RNU6-252P-201ENST00000363232 107 ntBASIC7.34□□□□□ -1.23
USP11P51784 SNORD35A-201ENST00000363389 86 ntBASIC7.34□□□□□ -1.23
USP11P51784 RNU4-51P-201ENST00000364206 140 ntBASIC7.34□□□□□ -1.23
USP11P51784 RNA5SP485-201ENST00000365053 119 ntBASIC7.34□□□□□ -1.23
USP11P51784 USP9YP33-201ENST00000412220 421 ntBASIC7.34□□□□□ -1.23
USP11P51784 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.34□□□□□ -1.23
USP11P51784 AL049610.1-201ENST00000423374 372 ntBASIC7.34□□□□□ -1.23
USP11P51784 CENPIP1-201ENST00000425713 902 ntBASIC7.34□□□□□ -1.23
USP11P51784 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.34□□□□□ -1.23
USP11P51784 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.34□□□□□ -1.23
USP11P51784 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.34□□□□□ -1.23
USP11P51784 PTGES3P1-201ENST00000439531 483 ntBASIC7.34□□□□□ -1.23
USP11P51784 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.34□□□□□ -1.23
USP11P51784 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.34□□□□□ -1.23
USP11P51784 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.34□□□□□ -1.23
USP11P51784 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.34□□□□□ -1.23
USP11P51784 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.34□□□□□ -1.23
USP11P51784 AC116353.2-201ENST00000505332 712 ntBASIC7.34□□□□□ -1.23
USP11P51784 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.34□□□□□ -1.23
USP11P51784 SNORA74.1-201ENST00000516320 180 ntBASIC7.34□□□□□ -1.23
USP11P51784 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.34□□□□□ -1.23
USP11P51784 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.34□□□□□ -1.23
USP11P51784 AC135983.3-201ENST00000528049 1226 ntBASIC7.34□□□□□ -1.23
USP11P51784 AC008055.1-201ENST00000547032 609 ntBASIC7.34□□□□□ -1.23
USP11P51784 ELOCP32-201ENST00000548625 324 ntBASIC7.34□□□□□ -1.23
USP11P51784 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.34□□□□□ -1.23
USP11P51784 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.34□□□□□ -1.23
USP11P51784 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.34□□□□□ -1.23
USP11P51784 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.34□□□□□ -1.23
USP11P51784 AC090616.1-201ENST00000583895 447 ntBASIC7.34□□□□□ -1.23
USP11P51784 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.34□□□□□ -1.23
USP11P51784 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.34□□□□□ -1.23
USP11P51784 AC138749.5-201ENST00000611461 208 ntBASIC7.34□□□□□ -1.23
USP11P51784 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.34□□□□□ -1.23
USP11P51784 AC012676.3-201ENST00000614983 479 ntBASIC7.34□□□□□ -1.23
USP11P51784 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.34□□□□□ -1.23
USP11P51784 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USP11P51784 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.34□□□□□ -1.23
USP11P51784 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
USP11P51784 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.24
USP11P51784 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.34□□□□□ -1.24
USP11P51784 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.34□□□□□ -1.24
USP11P51784 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.33□□□□□ -1.24
USP11P51784 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.33□□□□□ -1.24
USP11P51784 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
USP11P51784 Y_RNA.41-201ENST00000362646 102 ntBASIC7.33□□□□□ -1.24
USP11P51784 SNORD116.1-201ENST00000365628 92 ntBASIC7.33□□□□□ -1.24
USP11P51784 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 RNU6-224P-201ENST00000384055 107 ntBASIC7.33□□□□□ -1.24
USP11P51784 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
USP11P51784 RPL7P27-201ENST00000403775 720 ntBASIC7.33□□□□□ -1.24
USP11P51784 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.33□□□□□ -1.24
USP11P51784 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USP11P51784 RN7SKP281-201ENST00000410472 352 ntBASIC7.33□□□□□ -1.24
USP11P51784 RPL21P50-201ENST00000417698 477 ntBASIC7.33□□□□□ -1.24
USP11P51784 RPL7P53-201ENST00000421245 739 ntBASIC7.33□□□□□ -1.24
USP11P51784 ZDHHC20P2-201ENST00000424108 429 ntBASIC7.33□□□□□ -1.24
USP11P51784 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.33□□□□□ -1.24
USP11P51784 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.33□□□□□ -1.24
USP11P51784 COX7BP2-201ENST00000437976 242 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms