Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR4260-201ENST00000583107 67 ntBASIC5.84□□□□□ -1.47
HADHAP40939 AC005520.3-201ENST00000602874 370 ntBASIC5.84□□□□□ -1.47
HADHAP40939 AL162574.2-201ENST00000614618 657 ntBASIC5.84□□□□□ -1.47
HADHAP40939 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.84□□□□□ -1.47
HADHAP40939 AC105105.5-201ENST00000622635 1294 ntBASIC5.84□□□□□ -1.47
HADHAP40939 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HADHAP40939 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HADHAP40939 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.84□□□□□ -1.47
HADHAP40939 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HADHAP40939 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HADHAP40939 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HADHAP40939 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HADHAP40939 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HADHAP40939 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.84□□□□□ -1.48
HADHAP40939 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.48
HADHAP40939 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 TTC39DP-201ENST00000416781 1688 ntBASIC5.83□□□□□ -1.48
HADHAP40939 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 RNU1-136P-201ENST00000384181 164 ntBASIC5.83□□□□□ -1.48
HADHAP40939 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
HADHAP40939 OR1F12-201ENST00000402365 945 ntBASIC5.83□□□□□ -1.48
HADHAP40939 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.83□□□□□ -1.48
HADHAP40939 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.83□□□□□ -1.48
HADHAP40939 AC093084.1-201ENST00000424233 687 ntBASIC5.83□□□□□ -1.48
HADHAP40939 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.83□□□□□ -1.48
HADHAP40939 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 AC242426.1-201ENST00000435270 960 ntBASIC5.83□□□□□ -1.48
HADHAP40939 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.83□□□□□ -1.48
HADHAP40939 Z84478.1-201ENST00000438230 1219 ntBASIC5.83□□□□□ -1.48
HADHAP40939 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.83□□□□□ -1.48
HADHAP40939 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.83□□□□□ -1.48
HADHAP40939 MEMO1P4-201ENST00000453590 386 ntBASIC5.83□□□□□ -1.48
HADHAP40939 ACA64.1-201ENST00000459171 127 ntBASIC5.83□□□□□ -1.48
HADHAP40939 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.83□□□□□ -1.48
HADHAP40939 HMGB1P47-201ENST00000511281 589 ntBASIC5.83□□□□□ -1.48
HADHAP40939 OR5H7P-201ENST00000514084 930 ntBASIC5.83□□□□□ -1.48
HADHAP40939 AC060775.1-201ENST00000518241 520 ntBASIC5.83□□□□□ -1.48
HADHAP40939 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 AP000648.1-201ENST00000529682 397 ntBASIC5.83□□□□□ -1.48
HADHAP40939 AC006530.1-201ENST00000555980 571 ntBASIC5.83□□□□□ -1.48
HADHAP40939 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.83□□□□□ -1.48
HADHAP40939 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 AL031601.1-201ENST00000605702 394 ntBASIC5.83□□□□□ -1.48
HADHAP40939 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.83□□□□□ -1.48
HADHAP40939 Z95327.3-201ENST00000610385 572 ntBASIC5.83□□□□□ -1.48
HADHAP40939 AC006840.1-201ENST00000623069 542 ntBASIC5.83□□□□□ -1.48
HADHAP40939 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HADHAP40939 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.83□□□□□ -1.48
HADHAP40939 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.83□□□□□ -1.48
HADHAP40939 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.83□□□□□ -1.48
HADHAP40939 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 GVINP1-202ENST00000531871 7271 ntBASIC5.83□□□□□ -1.48
HADHAP40939 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HADHAP40939 AP004607.3-201ENST00000530354 3915 ntBASIC5.82□□□□□ -1.48
HADHAP40939 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
HADHAP40939 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.82□□□□□ -1.48
HADHAP40939 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.82□□□□□ -1.48
HADHAP40939 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.82□□□□□ -1.48
HADHAP40939 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HADHAP40939 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 RNA5SP477-201ENST00000362639 119 ntBASIC5.82□□□□□ -1.48
HADHAP40939 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 RNA5SP91-201ENST00000390902 119 ntBASIC5.82□□□□□ -1.48
HADHAP40939 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
HADHAP40939 SLC20A1P1-201ENST00000413906 956 ntBASIC5.82□□□□□ -1.48
HADHAP40939 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 BTF3P9-201ENST00000418784 283 ntBASIC5.82□□□□□ -1.48
HADHAP40939 AC066692.1-201ENST00000421721 457 ntBASIC5.82□□□□□ -1.48
HADHAP40939 AC126120.1-201ENST00000431082 470 ntBASIC5.82□□□□□ -1.48
HADHAP40939 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HADHAP40939 AC138761.5-201ENST00000433967 325 ntBASIC5.82□□□□□ -1.48
HADHAP40939 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.82□□□□□ -1.48
HADHAP40939 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.82□□□□□ -1.48
HADHAP40939 AC108751.3-201ENST00000461814 1020 ntBASIC5.82□□□□□ -1.48
HADHAP40939 AL157777.1-201ENST00000468100 304 ntBASIC5.82□□□□□ -1.48
HADHAP40939 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.82□□□□□ -1.48
HADHAP40939 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms