Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.04□□□□□ -1.6
SHC1P29353 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHC1P29353 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHC1P29353 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.04□□□□□ -1.6
SHC1P29353 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.03□□□□□ -1.6
SHC1P29353 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SHC1P29353 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.03□□□□□ -1.6
SHC1P29353 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 HSPD1P7-201ENST00000447985 1686 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC144833.1-201ENST00000567953 4089 ntBASIC5.03□□□□□ -1.6
SHC1P29353 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 AL121886.1-201ENST00000358609 435 ntBASIC5.03□□□□□ -1.6
SHC1P29353 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.03□□□□□ -1.6
SHC1P29353 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.03□□□□□ -1.6
SHC1P29353 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 RNA5SP178-201ENST00000410380 128 ntBASIC5.03□□□□□ -1.6
SHC1P29353 SDHDP6-201ENST00000414693 480 ntBASIC5.03□□□□□ -1.6
SHC1P29353 HYALP1-201ENST00000417674 1279 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC244453.4-201ENST00000419150 388 ntBASIC5.03□□□□□ -1.6
SHC1P29353 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.03□□□□□ -1.6
SHC1P29353 TMEM183AP1-205ENST00000432739 290 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.03□□□□□ -1.6
SHC1P29353 AL390119.1-201ENST00000440329 312 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC019185.1-201ENST00000442718 389 ntBASIC5.03□□□□□ -1.6
SHC1P29353 LINC02210-201ENST00000444561 288 ntBASIC5.03□□□□□ -1.6
SHC1P29353 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.03□□□□□ -1.6
SHC1P29353 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.03□□□□□ -1.6
SHC1P29353 RPS27AP2-201ENST00000457576 465 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC023141.9-201ENST00000458734 412 ntBASIC5.03□□□□□ -1.6
SHC1P29353 RN7SL174P-201ENST00000475578 289 ntBASIC5.03□□□□□ -1.6
SHC1P29353 RN7SL717P-201ENST00000478343 297 ntBASIC5.03□□□□□ -1.6
SHC1P29353 RN7SL101P-201ENST00000496350 279 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.03□□□□□ -1.6
SHC1P29353 SEPT10P1-201ENST00000517342 1162 ntBASIC5.03□□□□□ -1.6
SHC1P29353 OR4A17P-201ENST00000526032 904 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.03□□□□□ -1.6
SHC1P29353 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 MIR1273E-201ENST00000581165 102 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.03□□□□□ -1.6
SHC1P29353 FO393422.1-201ENST00000603908 708 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC104695.2-201ENST00000605056 775 ntBASIC5.03□□□□□ -1.6
SHC1P29353 PPATP2-201ENST00000605635 508 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AL133406.3-201ENST00000606817 541 ntBASIC5.03□□□□□ -1.6
SHC1P29353 AC010632.3-201ENST00000611377 369 ntBASIC5.03□□□□□ -1.6
SHC1P29353 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 AP005212.4-201ENST00000614206 710 ntBASIC5.03□□□□□ -1.6
SHC1P29353 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SHC1P29353 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.03□□□□□ -1.6
SHC1P29353 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHC1P29353 AC006484.1-201ENST00000435086 1884 ntBASIC5.03□□□□□ -1.6
SHC1P29353 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 MRRFP1-201ENST00000435941 1675 ntBASIC5.02□□□□□ -1.61
SHC1P29353 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHC1P29353 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHC1P29353 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHC1P29353 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHC1P29353 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHC1P29353 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 AL512422.1-201ENST00000407033 553 ntBASIC5.02□□□□□ -1.61
SHC1P29353 MTND3P20-201ENST00000407663 186 ntBASIC5.02□□□□□ -1.61
SHC1P29353 TNPO1P1-201ENST00000423641 1138 ntBASIC5.02□□□□□ -1.61
SHC1P29353 CHEK2P5-201ENST00000423877 246 ntBASIC5.02□□□□□ -1.61
SHC1P29353 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.02□□□□□ -1.61
SHC1P29353 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.02□□□□□ -1.61
SHC1P29353 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 NDUFB4P8-201ENST00000435351 367 ntBASIC5.02□□□□□ -1.61
SHC1P29353 OR6D1P-201ENST00000436165 939 ntBASIC5.02□□□□□ -1.61
SHC1P29353 AC012075.1-201ENST00000436549 580 ntBASIC5.02□□□□□ -1.61
SHC1P29353 NANOGP9-201ENST00000439890 892 ntBASIC5.02□□□□□ -1.61
SHC1P29353 AL450996.1-201ENST00000445574 1202 ntBASIC5.02□□□□□ -1.61
SHC1P29353 AL596266.1-201ENST00000448132 400 ntBASIC5.02□□□□□ -1.61
SHC1P29353 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHC1P29353 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.02□□□□□ -1.61
SHC1P29353 RN7SL583P-201ENST00000475692 287 ntBASIC5.02□□□□□ -1.61
SHC1P29353 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.02□□□□□ -1.61
SHC1P29353 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.02□□□□□ -1.61
SHC1P29353 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms