Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCD3P28288 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 THAP12P9-201ENST00000503971 2360 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ABCD3P28288 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 AC093775.1-201ENST00000624154 1868 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 SELENOWP1-201ENST00000322792 252 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 RPS27AP11-201ENST00000402798 447 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 SNORA11.5-201ENST00000408163 128 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 RN7SKP222-201ENST00000410651 315 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 RNU4-27P-201ENST00000410889 139 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 AL158050.1-201ENST00000416077 457 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 VN1R42P-201ENST00000424651 344 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 DPY19L1P2-201ENST00000426647 915 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC099677.3-201ENST00000427081 395 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AL035458.1-201ENST00000433096 585 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AL512661.1-201ENST00000434586 1253 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AL445928.1-201ENST00000435545 222 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AP000936.3-201ENST00000438127 255 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AL138899.2-201ENST00000439139 499 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 CUBNP2-201ENST00000443534 1139 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 HMGN1P2-201ENST00000445197 310 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 RPL34P26-201ENST00000445636 354 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 GEMIN2P1-201ENST00000454246 752 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 SLC25A51P1-201ENST00000468432 871 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.5□□□□□ -1.53
ABCD3P28288 SETP6-201ENST00000479329 568 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 RN7SL193P-201ENST00000491708 276 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.5□□□□□ -1.53
ABCD3P28288 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.5□□□□□ -1.53
ABCD3P28288 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.5□□□□□ -1.53
ABCD3P28288 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 AC112518.2-201ENST00000508565 425 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 OR5H7P-201ENST00000514084 930 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.5□□□□□ -1.53
ABCD3P28288 AC027026.1-201ENST00000532323 742 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 AL109741.3-201ENST00000561748 592 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 AL138895.2-201ENST00000603019 178 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC018926.1-201ENST00000616335 435 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC095038.2-201ENST00000621464 1070 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AC129778.1-202ENST00000623812 261 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AL591379.1-207ENST00000635982 261 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCD3P28288 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.5□□□□□ -1.53
ABCD3P28288 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.5□□□□□ -1.53
ABCD3P28288 AF287957.1-201ENST00000607368 1595 ntBASIC5.5□□□□□ -1.53
ABCD3P28288 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ABCD3P28288 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ABCD3P28288 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.5□□□□□ -1.53
ABCD3P28288 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ABCD3P28288 AL136520.1-201ENST00000600311 1322 ntBASIC5.49□□□□□ -1.53
ABCD3P28288 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCD3P28288 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.49□□□□□ -1.53
ABCD3P28288 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.49□□□□□ -1.53
ABCD3P28288 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.49□□□□□ -1.53
ABCD3P28288 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCD3P28288 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ABCD3P28288 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ABCD3P28288 RNA5SP273-201ENST00000362484 113 ntBASIC5.49□□□□□ -1.53
ABCD3P28288 RNA5SP477-201ENST00000362639 119 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms