Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 AC010547.6-201ENST00000571789 193 ntBASIC5.58□□□□□ -1.52
CDH3P22223 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH3P22223 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 MIR6862-1-201ENST00000613016 70 ntBASIC5.58□□□□□ -1.52
CDH3P22223 MIR6862-2-201ENST00000614755 70 ntBASIC5.58□□□□□ -1.52
CDH3P22223 MIR6729-201ENST00000618194 65 ntBASIC5.58□□□□□ -1.52
CDH3P22223 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH3P22223 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH3P22223 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH3P22223 OR13C1P-202ENST00000641378 2919 ntBASIC5.58□□□□□ -1.52
CDH3P22223 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH3P22223 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH3P22223 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 MFSD8-219ENST00000641228 2559 ntBASIC5.57□□□□□ -1.52
CDH3P22223 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 RNU4-23P-201ENST00000362839 140 ntBASIC5.57□□□□□ -1.52
CDH3P22223 RNU1-146P-201ENST00000364015 165 ntBASIC5.57□□□□□ -1.52
CDH3P22223 RNA5SP394-201ENST00000364216 119 ntBASIC5.57□□□□□ -1.52
CDH3P22223 AC083799.1-201ENST00000366451 910 ntBASIC5.57□□□□□ -1.52
CDH3P22223 AL357752.1-201ENST00000412817 349 ntBASIC5.57□□□□□ -1.52
CDH3P22223 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH3P22223 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.57□□□□□ -1.52
CDH3P22223 AC093155.2-201ENST00000420734 937 ntBASIC5.57□□□□□ -1.52
CDH3P22223 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH3P22223 SUMO2P3-201ENST00000438311 288 ntBASIC5.57□□□□□ -1.52
CDH3P22223 AC015983.1-201ENST00000441577 373 ntBASIC5.57□□□□□ -1.52
CDH3P22223 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH3P22223 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH3P22223 AC018638.3-201ENST00000461273 132 ntBASIC5.57□□□□□ -1.52
CDH3P22223 RN7SL717P-201ENST00000478343 297 ntBASIC5.57□□□□□ -1.52
CDH3P22223 RPL32P33-201ENST00000487023 394 ntBASIC5.57□□□□□ -1.52
CDH3P22223 AGGF1P3-201ENST00000493675 1213 ntBASIC5.57□□□□□ -1.52
CDH3P22223 RN7SL101P-201ENST00000496350 279 ntBASIC5.57□□□□□ -1.52
CDH3P22223 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH3P22223 RNA5SP230-201ENST00000517039 122 ntBASIC5.57□□□□□ -1.52
CDH3P22223 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH3P22223 TMEM97P2-201ENST00000517841 403 ntBASIC5.57□□□□□ -1.52
CDH3P22223 MTND2P7-201ENST00000521337 640 ntBASIC5.57□□□□□ -1.52
CDH3P22223 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH3P22223 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH3P22223 AC027544.3-201ENST00000535082 757 ntBASIC5.57□□□□□ -1.52
CDH3P22223 AC078878.1-201ENST00000539832 958 ntBASIC5.57□□□□□ -1.52
CDH3P22223 IGBP1P1-201ENST00000554337 1009 ntBASIC5.57□□□□□ -1.52
CDH3P22223 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH3P22223 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH3P22223 AL390318.1-201ENST00000624564 687 ntBASIC5.57□□□□□ -1.52
CDH3P22223 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH3P22223 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CDH3P22223 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH3P22223 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.57□□□□□ -1.52
CDH3P22223 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CDH3P22223 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH3P22223 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 AC027228.2-201ENST00000567141 2154 ntBASIC5.56□□□□□ -1.52
CDH3P22223 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 FBXL21-201ENST00000297158 1305 ntBASIC5.56□□□□□ -1.52
CDH3P22223 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDH3P22223 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDH3P22223 AL512422.1-201ENST00000407033 553 ntBASIC5.56□□□□□ -1.52
CDH3P22223 RN7SKP206-201ENST00000410823 293 ntBASIC5.56□□□□□ -1.52
CDH3P22223 RMRPP5-201ENST00000411156 267 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH3P22223 AL136231.1-201ENST00000429407 730 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDH3P22223 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH3P22223 AC073072.2-201ENST00000447425 348 ntBASIC5.56□□□□□ -1.52
CDH3P22223 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 OR2AF1P-201ENST00000454899 889 ntBASIC5.56□□□□□ -1.52
CDH3P22223 RPS23P6-201ENST00000466136 431 ntBASIC5.56□□□□□ -1.52
CDH3P22223 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDH3P22223 RPS17P15-201ENST00000475609 349 ntBASIC5.56□□□□□ -1.52
CDH3P22223 RN7SL273P-201ENST00000481561 299 ntBASIC5.56□□□□□ -1.52
CDH3P22223 OR11I1P-201ENST00000486033 954 ntBASIC5.56□□□□□ -1.52
CDH3P22223 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH3P22223 RNU6-615P-201ENST00000516065 106 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms