Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.2□□□□□ -1.26
NFKB1P19838 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.2□□□□□ -1.26
NFKB1P19838 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.2□□□□□ -1.26
NFKB1P19838 AP005119.2-201ENST00000579735 1105 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 SEPT7P9-203ENST00000604116 343 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AP000894.4-201ENST00000610185 483 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 UBE2Q2P2-203ENST00000613592 761 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AL353726.1-201ENST00000614041 1000 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AC143336.1-201ENST00000614164 836 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 AC002553.4-201ENST00000616896 331 ntBASIC7.2□□□□□ -1.26
NFKB1P19838 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NFKB1P19838 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NFKB1P19838 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
NFKB1P19838 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.2□□□□□ -1.26
NFKB1P19838 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NFKB1P19838 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 AL451064.2-201ENST00000623514 1654 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.19□□□□□ -1.26
NFKB1P19838 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.19□□□□□ -1.26
NFKB1P19838 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.19□□□□□ -1.26
NFKB1P19838 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NFKB1P19838 Y_RNA.302-201ENST00000364997 102 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 RNA5SP172-201ENST00000365061 118 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.19□□□□□ -1.26
NFKB1P19838 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 MIR152-201ENST00000385212 87 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 MT-TD-201ENST00000387419 68 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 FAUP2-201ENST00000394301 401 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NFKB1P19838 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.19□□□□□ -1.26
NFKB1P19838 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.19□□□□□ -1.26
NFKB1P19838 FAM96AP1-201ENST00000430879 482 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 ATP5HP2-201ENST00000433885 485 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 DPPA3P1-201ENST00000448050 469 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 AC092421.1-201ENST00000448148 418 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 RBMY3AP-201ENST00000449381 1145 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 PCMTD1P3-201ENST00000451824 472 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 RPLP0P1-201ENST00000457002 361 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC7.19□□□□□ -1.26
NFKB1P19838 WBP1LP1-201ENST00000460451 896 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 RPS4XP12-201ENST00000461747 709 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 VPS26AP1-201ENST00000483197 979 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 MTCYBP17-201ENST00000503579 789 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 AC106872.4-201ENST00000510050 523 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.19□□□□□ -1.26
NFKB1P19838 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 AC090971.3-201ENST00000557871 1041 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 MIR548AB-201ENST00000584917 84 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 UBE2V2P2-201ENST00000587677 504 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 AC010680.3-201ENST00000604215 520 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 AC005070.2-201ENST00000604391 260 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 AP001836.1-201ENST00000604675 523 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 AC063962.1-201ENST00000608199 521 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 AC055764.2-201ENST00000610089 670 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.19□□□□□ -1.26
NFKB1P19838 FKBP1AP4-201ENST00000631775 336 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.19□□□□□ -1.26
NFKB1P19838 AC009237.3-203ENST00000442128 3551 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.19□□□□□ -1.26
NFKB1P19838 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NFKB1P19838 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.19□□□□□ -1.26
NFKB1P19838 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms