Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC022616.2-201ENST00000523185 300 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 OR4A17P-201ENST00000526032 904 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.48□□□□□ -1.53
XRCC1P18887 AC092944.2-201ENST00000605443 889 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 PPATP2-201ENST00000605635 508 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 AC010245.2-201ENST00000606908 1167 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.48□□□□□ -1.53
XRCC1P18887 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
XRCC1P18887 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.48□□□□□ -1.53
XRCC1P18887 MTCO1P7-201ENST00000419523 1542 ntBASIC5.48□□□□□ -1.53
XRCC1P18887 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
XRCC1P18887 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
XRCC1P18887 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.47□□□□□ -1.53
XRCC1P18887 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.47□□□□□ -1.53
XRCC1P18887 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
XRCC1P18887 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
XRCC1P18887 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
XRCC1P18887 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
XRCC1P18887 RNA5SP326-201ENST00000363209 110 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 NDUFB4P8-201ENST00000435351 367 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 SPRYD7P1-201ENST00000443861 570 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.47□□□□□ -1.53
XRCC1P18887 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.47□□□□□ -1.53
XRCC1P18887 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.47□□□□□ -1.53
XRCC1P18887 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.47□□□□□ -1.53
XRCC1P18887 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.47□□□□□ -1.53
XRCC1P18887 BX510359.5-201ENST00000515651 304 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 IGLV3-24-201ENST00000517477 197 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.47□□□□□ -1.53
XRCC1P18887 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
XRCC1P18887 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.47□□□□□ -1.53
XRCC1P18887 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.47□□□□□ -1.53
XRCC1P18887 AC139697.1-201ENST00000548429 745 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.47□□□□□ -1.53
XRCC1P18887 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.47□□□□□ -1.53
XRCC1P18887 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.47□□□□□ -1.53
XRCC1P18887 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.47□□□□□ -1.53
XRCC1P18887 AC107993.1-201ENST00000591343 684 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 AC079395.2-201ENST00000610982 737 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 AC132068.1-201ENST00000623805 459 ntBASIC5.47□□□□□ -1.53
XRCC1P18887 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
XRCC1P18887 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.47□□□□□ -1.53
XRCC1P18887 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.47□□□□□ -1.53
XRCC1P18887 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
XRCC1P18887 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
XRCC1P18887 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
XRCC1P18887 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
XRCC1P18887 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
XRCC1P18887 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.47□□□□□ -1.53
XRCC1P18887 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
XRCC1P18887 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
XRCC1P18887 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
XRCC1P18887 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.46□□□□□ -1.53
XRCC1P18887 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.46□□□□□ -1.53
XRCC1P18887 PWAR1-201ENST00000624188 2414 ntBASIC5.46□□□□□ -1.53
XRCC1P18887 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.46□□□□□ -1.54
XRCC1P18887 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
XRCC1P18887 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
XRCC1P18887 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
XRCC1P18887 RN7SKP162-201ENST00000363605 345 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 RN7SKP28-201ENST00000364770 305 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
XRCC1P18887 RNU6-167P-201ENST00000384292 106 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 MIR551A-201ENST00000385042 96 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AL358178.1-201ENST00000407698 397 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AC244033.1-201ENST00000426826 870 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.46□□□□□ -1.54
XRCC1P18887 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.46□□□□□ -1.54
XRCC1P18887 AC019185.1-201ENST00000442718 389 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.46□□□□□ -1.54
XRCC1P18887 AL161722.1-201ENST00000446972 1032 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 VDAC2P4-201ENST00000452925 711 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 CBX1P2-201ENST00000453841 458 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AC083899.1-201ENST00000454465 3819 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.46□□□□□ -1.54
XRCC1P18887 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.46□□□□□ -1.54
XRCC1P18887 SIAH1P1-201ENST00000479411 923 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 RN7SL184P-201ENST00000488308 297 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.46□□□□□ -1.54
XRCC1P18887 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
XRCC1P18887 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.46□□□□□ -1.54
XRCC1P18887 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.46□□□□□ -1.54
XRCC1P18887 AC090022.1-201ENST00000546569 311 ntBASIC5.46□□□□□ -1.54
XRCC1P18887 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms